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View Structure Prediction Details

Protein: YPR114W
Organism: Saccharomyces cerevisiae
Length: 315 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YPR114W.

Description E-value Query
Range
Subject
Range
YP114_YEAST - Uncharacterized TLC domain-containing protein YPR114W OS=Saccharomyces cerevisiae (strain ATCC 20450...
YPR114W - Putative protein of unknown function
6.0E-68 [1..315] [1..315]
gi|113534153, gi... - gi|34909246|ref|NP_915970.1| B1148D12.11 [Oryza sativa (japonica cultivar-group)], gi|15528785|dbj|B...
3.0E-48 [50..314] [5..260]
gi|79319015, gi|... - gi|79319015|ref|NP_001031121.1| unknown protein [Arabidopsis thaliana], gi|20466069|gb|AAM19956.1| A...
2.0E-47 [46..304] [17..275]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
5.0E-45 [61..307] [18..258]
gi|157071803, gi... - gi|164427582|ref|XP_965364.2| hypothetical protein NCU02977 [Neurospora crassa OR74A], gi|157071803|...
gi|16945392 - gi|16945392|emb|CAB97314.2| conserved hypothetical protein [Neurospora crassa]
3.0E-40 [35..309] [32..310]
TMEM56 - transmembrane protein 56
9.0E-38 [53..312] [5..261]

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Predicted Domain #1
Region A:
Residues: [1-77]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVLLSLPQP ELFKTTVIPF LANRNIIKSE AILSNLHSIF YVAIFYHIWF LFGKWILFPH  60
   61 LVKWKLDYDQ KHNVKKD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.663 a.77.1 DEATH domain
View Download 0.672 a.126.1 Serum albumin-like
View Download 0.685 a.12.1 Kix domain of CBP (creb binding protein)
View Download 0.545 a.163.1 Crustacean CHH/MIH/GIH neurohormone
View Download 0.685 a.12.1 Kix domain of CBP (creb binding protein)
View Download 0.672 a.126.1 Serum albumin-like
View Download 0.663 a.77.1 DEATH domain
View Download 0.632 a.77.1 DEATH domain
View Download 0.545 a.163.1 Crustacean CHH/MIH/GIH neurohormone
View Download 0.487 a.20.1 PGBD-like
View Download 0.463 d.58.17 Metal-binding domain
View Download 0.449 a.57.1 Protein HNS-dependent expression A; HdeA
View Download 0.440 a.56.1 CO dehydrogenase ISP C-domain like
View Download 0.435 a.58.1 Chemotaxis receptor methyltransferase CheR, N-terminal domain
View Download 0.409 a.74.1 Cyclin-like
View Download 0.403 d.58.23 Probable ACP-binding domain of malonyl-CoA ACP transacylase
View Download 0.395 a.77.1 DEATH domain
View Download 0.341 a.76.1 Iron-dependent represor protein, dimerization domain
View Download 0.331 a.138.1 Multiheme cytochromes
View Download 0.313 a.35.1 lambda repressor-like DNA-binding domains
View Download 0.313 a.61.1 Retroviral matrix proteins
View Download 0.306 a.24.13 Domain of the SRP/SRP receptor G-proteins
View Download 0.299 d.17.2 Copper amine oxidase, domains 1 and 2
View Download 0.281 d.26.2 Colicin E3 immunity protein
View Download 0.279 a.65.1 Annexin
View Download 0.278 d.58.5 GlnB-like
View Download 0.274 d.58.38 Urease metallochaperone UreE, C-terminal domain
View Download 0.270 d.58.7 RNA-binding domain, RBD
View Download 0.270 a.77.1 DEATH domain
View Download 0.261 a.144.1 PABC (PABP) domain
View Download 0.258 d.58.2 Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
View Download 0.256 a.42.1 MDM2
View Download 0.256 d.58.24 CheY-binding domain of CheA
View Download 0.255 a.135.1 Tetraspanin
View Download 0.250 a.24.7 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
View Download 0.243 a.40.1 Calponin-homology domain, CH-domain
View Download 0.243 a.4.5 "Winged helix" DNA-binding domain
View Download 0.242 a.55.1 IHF-like DNA-binding proteins
View Download 0.236 a.77.1 DEATH domain
View Download 0.231 d.150.1 4'-phosphopantetheinyl transferase
View Download 0.208 a.52.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
View Download 0.202 a.144.1 PABC (PABP) domain

Predicted Domain #2
Region A:
Residues: [78-315]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EKTTSERQAQ HYKKKYTSLI NQSSVHLISL LQSIVVLYYS LKFLLDPKAS AEPYQTSHSR  60
   61 VFTENRDTQV ICIFAIGYFV WDIYISTMYS TFPFVVHGII STVVFCIGLK PYIQYYAPVF 120
  121 LMFELSNPSL NFRWFGIKFL PQKSKFCSLL LLLNNLTLMV VFFAARIAWG WFQIGKLCYD 180
  181 FYQVRNEPGF LVFDTIVILA GNFVLDILNV IWFSTMVSVA AKVLKKGESV DKVTKNEQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle