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View Structure Prediction Details

Protein: YPR078C
Organism: Saccharomyces cerevisiae
Length: 372 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YPR078C.

Description E-value Query
Range
Subject
Range
YPR078C - Putative protein of unknown function; possible role in DNA metabolism and/or in genome stability; ex...
YP078_YEAST - Uncharacterized protein YPR078C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPR078C ...
0.0 [1..372] [1..372]

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Predicted Domain #1
Region A:
Residues: [1-372]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTISGVLPT VLSPSELRSD DERTFQFDEE AEITTHLTES EDLRRLINET AQLGVRVDHI  60
   61 HDKTDQEIAR LEKVIKEVTE SDTFFRSCSG WFKTNKNFSD SESSSNTQLK SLSQLHGRYD 120
  121 RDWRQRLNKW FRKNKSKLAL PSDNNLEEVN DDKVYGYGED LMERGKTPYF SDIDDFMNGL 180
  181 NIISPLTPDD FENDDTLVKI DETCQIHSAS EPEKTSISPT FGKNIKKELV TDDTESIISG 240
  241 PPLQENKKTL LKYRYVRTSL DMLGSEKSSS KNNSGGMFRI FHKSANFGDK NQENVPRVWD 300
  301 TLRNNLGREI YLLQGRFKKW TTKHQNLKKG QPCKDEDAVT VPLPSSDPGK ETQLETKLCF 360
  361 VPEPGDQPLV QA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle