YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: GLN1
Organism: Saccharomyces cerevisiae
Length: 370 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GLN1.

Description E-value Query
Range
Subject
Range
GLNA_MOUSE - Glutamine synthetase OS=Mus musculus GN=Glul PE=1 SV=6
0.0 [1..365] [1..371]
gi|114568287, gi... - gi|114568289|ref|XP_001160939.1| PREDICTED: glutamine synthetase isoform 10 [Pan troglodytes], gi|11...
CCDS1344.1_1 - null
gi|190690585, gi... - gi|60814242|gb|AAX36292.1| glutamate-ammonia ligase [synthetic construct], gi|190691949|gb|ACE87749....
gi|109019151, gi... - gi|109019157|ref|XP_001114930.1| PREDICTED: glutamine synthetase isoform 8 [Macaca mulatta], gi|1090...
GLUL - glutamate-ammonia ligase
0.0 [1..365] [1..371]
gi|543097 - pir||S41452 glutamate-ammonia ligase (EC 6.3.1.2) - pig
GLNA_PIG - Glutamine synthetase OS=Sus scrofa GN=GLUL PE=2 SV=3
0.0 [1..365] [1..371]
GLNA_CANLF - Glutamine synthetase OS=Canis lupus familiaris GN=GLUL PE=1 SV=3
0.0 [1..365] [1..371]
GLNA_RAT - Glutamine synthetase OS=Rattus norvegicus GN=Glul PE=1 SV=3
0.0 [1..365] [1..371]

Back

Predicted Domain #1
Region A:
Residues: [1-106]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEASIEKTQ ILQKYLELDQ RGRIIAEYVW IDGTGNLRSK GRTLKKRITS IDQLPEWNFD  60
   61 GSSTNQAPGH DSDIYLKPVA YYPDPFRRGD NIVVLAACYN NDGTPN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 237.218487
Match: 1f1hA_
Description: Glutamine synthetase, N-terminal domain; Glutamine synthetase, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [107-131]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KFNHRHEAAK LFAAHKDEEI WFGLE

[Run NCBI BLAST on this sequence.]

Region B:
Residues: [244-370]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WNGAGCHANV STKEMRQPGG TKYIEQAIEK LSKRHAEHIK LYGSDNDMRL TGRHETASMT  60
   61 AFSSGVANRG SSIRIPRSVA KEGYGYFEDR RPASNIDPYL VTGIMCETVC GAIDNADMTK 120
  121 EFERESS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 237.218487
Match: 1f1hA_
Description: Glutamine synthetase, N-terminal domain; Glutamine synthetase, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [132-243]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QEYTLFDMYD DVYGWPKGGY PAPQGPYYCG VGAGKVYARD MIEAHYRACL YAGLEISGIN  60
   61 AEVMPSQWEF QVGPCTGIDM GDQLWMARYF LHRVAEEFGI KISFHPKPLK GD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 237.218487
Match: 1f1hA_
Description: Glutamine synthetase, N-terminal domain; Glutamine synthetase, C-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle