| Protein: | CMR3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 317 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CMR3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [3..314] | [398..727] |
|
|
0.0 | [3..314] | [403..732] |
|
Region A: Residues: [1-191] |
1 11 21 31 41 51
| | | | | |
1 MNFSLSKQSS EKQSSYTDKS RSPNIGMCTV NYKSNLPLQV SAVDQLSTGK GTQFYGHNSY 60
61 KNERECYNST KINLPPISSL LPNFENNTPP NVDSRVQFPP QQVYQSMNVV PIVNEIYTPI 120
121 SMNATSDQYP IYYTESQQPI PHSQSPHLTS SAPLMMPVMV PTVYKPLTPY DKEPITIASE 180
181 PNFTAISMAS H
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [192-317] |
1 11 21 31 41 51
| | | | | |
1 PNAALELCHD RPKSVPPGYG VLPTMQEASN GRTKSEPGAV LNGSATFSDW KTDTRISSTK 60
61 LRKQCPVCGK ICSRPSTLKT HYLIHTGDTP FKCTWEGCTK SFNVKSNMLR HLKSHERKRN 120
121 KVLNTT
|
| Detection Method: | |
| Confidence: | 104.70927 |
| Match: | 1ubdC_ |
| Description: | Ying-yang 1 (yy1, zinc finger domain) |
Matching Structure (courtesy of the PDB): |
|
