YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: GRE1
Organism: Saccharomyces cerevisiae
Length: 168 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GRE1.

Description E-value Query
Range
Subject
Range
GRE1_YEAST - Protein GRE1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GRE1 PE=1 SV=1
GRE1 - Hydrophilin of unknown function; stress induced (osmotic, ionic, oxidative, heat shock and heavy met...
2.0E-42 [1..168] [1..168]

Back

Predicted Domain #1
Region A:
Residues: [1-168]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNLLNKFAD KLHGNDHDER YEDDNDDQTR QQRHEKHQQR EFRNQGSKAD PYGEENQGNF  60
   61 PQRQQPQSNL GGNTQFGGND FQQQTTDYTA GTGGGTYTQT YRETNTQGQL DDDEDDDFLT 120
  121 SGQQQKQGRT RGAQSNRYQS SNIGSGRRDL SGSGNDEYDD DSGNQGVW

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle