Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NIP100.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [42..814] | [859..1618] |
|
|
0.0 | [35..814] | [852..1618] |
|
|
0.0 | [35..814] | [855..1621] |
|
|
0.0 | [42..850] | [862..1656] |
|
|
0.0 | [35..814] | [856..1622] |
|
Region A: Residues: [1-342] |
1 11 21 31 41 51
| | | | | |
1 MRNAGVQVDT NMQKISLQDT VLVNEMKGRV KFIGETQFAK GIWYGIELDK PLGKNDGSAN 60
61 GIRYFDIDLK KANSNGGYYG LFCKKDTLQF YKPDDDEHSL LNGNAAQETI KNLQVKCESL 120
121 ASKLNKIKIE NHELKTSVEK LSTNETVLLS KISRLDKLVK ELKVENGNMK THLDNFNHLL 180
181 DASDSVMAPD LDKGTLLERS HLLQGLLDQT KLSYDKAMKV QEDLLEENTQ LLEENAVLSK 240
241 KISDLGLQLQ QTNNTIGDLA LQIEAQSKSS NIVDKLTNDN ILLTSNIKAL NNELEELQAK 300
301 EKLDENLRIT YEQLEQELRL QLSNLQSALE NEKEIAGTYI EE
|
| Detection Method: |  |
| Confidence: | 26.69897 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [343-445] |
1 11 21 31 41 51
| | | | | |
1 NSRLKATLES IEAKTSHKFQ SLELKVNTLQ EELYQNKLLK KFYQIYEPFA QPHLAALSSQ 60
61 LQYLAEVIES ENFGKLENIE IHIILKVLSS ISYALHIYTI KNT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.801 | 0.026 | microtubule binding | a.60.9 | lambda integrase-like, N-terminal domain |
|
Region A: Residues: [446-562] |
1 11 21 31 41 51
| | | | | |
1 PDHLETTLQC FKVNIAPISM WLSEFLQRKF SSKQETAFSI CQFLEDNKFL DKDVTLILKI 60
61 LHPILETTVP KLLAFLRTNS NFNDNDTLCL IGSLYERSLS LIARIDKLIG KEEISKQ
|
| Detection Method: | |
| Confidence: | 8.221849 |
| Match: | 1c1gA_ |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [563-790] |
1 11 21 31 41 51
| | | | | |
1 DNRLFLYPSC DITLSSILTI LFSDALFLRQ DYKRISSLKK LEVFFQGIES LLENITIFPE 60
61 QPSQQTSDSE SQCNIKEGNF SNSLLSDRLN EENIRLKEVL VQKENMLTEL ETKIKIIIGR 120
121 DLERKTLEEN IKTLKVELNN KNEENCGKTE ILNKLKEENF NLVNRLKNME LKLYQIKDNN 180
181 TLNKIYLDRE KVDRVNLVSE IMELRETIRR QIKEQKRVSI DFSWLDEL
|
| Detection Method: | |
| Confidence: | 8.221849 |
| Match: | 1c1gA_ |
| Description: | Tropomyosin |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [791-868] |
1 11 21 31 41 51
| | | | | |
1 PAVENKQPFK EHINHSLDTL GIEMFNFVST SRILDLKLDQ PLAEDELWHE RDHSYISYLK 60
61 RKRKNIRLKS QNVVTYYK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
