YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: ATG29
Organism: Saccharomyces cerevisiae
Length: 213 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATG29.

Description E-value Query
Range
Subject
Range
ATG29 - Autophagy-specific protein that is required for recruitment of other ATG proteins to the pre-autopha...
ATG29_YEAST - Autophagy-related protein 29 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ATG29 PE=1 ...
9.0E-96 [1..213] [1..213]

Back

Predicted Domain #1
Region A:
Residues: [1-213]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIMNSTNTVV YIKVKGRRPQ GFLDPPKFEW NGTKERQLWT MVSNLNYSQD QIDWQNLSKI  60
   61 FETPEFFLKK RTYKLFAEHL ELLQLQLEKK RDLEKYSNDQ VNEGMSDLIH KYTPTLQNDN 120
  121 LLNVSASPLT TERQDSEEVE TEVTNEALQH LQTSKILNIH KKTSDSENKP NDKLDKDGIN 180
  181 KEMECGSSDD DLSSSLSVSK SALEEALMDR LQF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [98-213]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NDQVNEGMSD LIHKYTPTLQ NDNLLNVSAS PLTTERQDSE EVETEVTNEA LQHLQTSKIL  60
   61 NIHKKTSDSE NKPNDKLDKD GINKEMECGS SDDDLSSSLS VSKSALEEAL MDRLQF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle