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View Structure Prediction Details

Protein: SET6
Organism: Saccharomyces cerevisiae
Length: 373 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SET6.

Description E-value Query
Range
Subject
Range
gi|31197415, gi|... - gi|31197415|ref|XP_307655.1| ENSANGP00000002208 [Anopheles gambiae str. PEST], gi|21291307|gb|EAA034...
234.0 [0..45] [368..119]

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Predicted Domain #1
Region A:
Residues: [1-84]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIDGDVHEI SPFFQVRQTK WGGRACFSNG NIPKGTTVLQ VSNFTGTSIS YEFRKEVCHN  60
   61 CFAYANAKTM KYKLNYDYLR DLVC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [85-373]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NAHYQINPKK FLGAGLWFCS EHCRTSYLQI PNIIELIECY EILLHHFPSM LKRYNYTSEQ  60
   61 EEKLNSILIS ENVIQSSWDE IESKWIPRIN NMKSAKRINQ LPPTCEDEYC CIRFVCESLF 120
  121 NLKYMDPQCI TYRAFNMLQS NELSKISKFP VLLHFQKLVF QTLYILLPSH LHRMLSIPLL 180
  181 RHILGTEYGN AFGLWQEGEA SDSREYFGYW VFPEASYFNH SCNPNITKYR KGNSMLFTMN 240
  241 RDIKKDEQIC IDYSGVLDLP TVKRRAFLAD SWFFDCACER CKSELQSVH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.522879
Match: 1ml9A
Description: Dim-5
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle