| Protein: | RNY1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 434 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RNY1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..434] | [1..434] |
|
|
4.0E-79 | [13..422] | [25..403] |
|
|
6.0E-75 | [10..419] | [15..398] |
|
|
4.0E-70 | [7..419] | [17..397] |
|
|
1.0E-64 | [11..419] | [31..416] |
|
|
6.0E-61 | [34..285] | [4..218] |
|
|
7.0E-61 | [34..285] | [4..217] |
|
|
1.0E-60 | [29..284] | [6..222] |
|
|
1.0E-60 | [29..285] | [6..221] |
|
Region A: Residues: [1-299] |
1 11 21 31 41 51
| | | | | |
1 MLLKNLHSLL QLPIFSNGAD KGIEPNCPIN IPLSCSNKTD IDNSCCFEYP GGIFLQTQFW 60
61 NYFPSKNDLN ETELVKELGP LDSFTIHGLW PDNCHGGYQQ FCNRSLQIDD VYYLLHDKKF 120
121 NNNDTSLQIS GEKLLEYLDL YWKSNNGNHE SLWIHEFNKH GTCISTIRPE CYTEWGANSV 180
181 DRKRAVYDYF RITYNLFKKL DTFSTLEKNN IVPSVDNSYS LEQIEAALSK EFEGKKVFIG 240
241 CDRHNSLNEV WYYNHLKGSL LSEMFVPMDS LAIRTNCKKD GIKFFPKGYV PTFRRRPNK
|
| Detection Method: |  |
| Confidence: | 233.69897 |
| Match: | 1bolA_ |
| Description: | Ribonuclease Rh |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [300-434] |
1 11 21 31 41 51
| | | | | |
1 GARYRGVVRL SNINNGDQMQ GFLIKNGHWM SQGTPANYEL IKSPYGNYYL RTNQGFCDII 60
61 SSSSNELVCK FRNIKDAGQF DFDPTKGGDG YIGYSGNYNW GGDTYPRRRN QSPIFSVDDE 120
121 QNSKKYKFKL KFIKN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
