YRC Public Data Repository - Protein Structure Prediction

Protein:	YPL071C
Organism:	Saccharomyces cerevisiae
Length:	156 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YPL071C.

Description	E-value	Query Range	Subject Range
YPL071C - Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to bo... YP071_YEAST - Uncharacterized protein YPL071C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPL071C ... gi\|151942724 - gi\|151942724\|gb\|EDN61070.1\| conserved protein [Saccharomyces cerevisiae YJM789]	2.0E-83	[1..156]	[1..156]

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Predicted Domain #1

Region A:
Residues: [1-156]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSRFARSNG NPNHIRKRNH SPDPIGIDNY KRKRLIIDLE NLSLNDKGPK NGHADDNNLI  60
   61 HNNIVFTDAI DDKVLKEIIK CSTSKRGDND LFYDKIWERL REKRLQIIKW VDYKEIAYLS 120
  121 WWKWFHNQMT SKYTYDGEAD TDVEMMAVDT DVDMDA

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits