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View Structure Prediction Details

Protein: LGE1
Organism: Saccharomyces cerevisiae
Length: 332 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LGE1.

Description E-value Query
Range
Subject
Range
LGE1 - Protein of unknown function; null mutant forms abnormally large cells, and homozygous diploid null m...
LGE1_YEAST - Transcriptional regulatory protein LGE1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=...
0.0 [1..332] [1..332]

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Predicted Domain #1
Region A:
Residues: [1-332]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGYTGNNYS RYSSTPPRQR GGYHHARRSR GGAGGSYYRG GNASYGARYN SDYEQPPQEG  60
   61 DLRQTGAYYR NGYTDTRPYY SANSRHYQAQ PSPRYNNGTN SYHLPQRGNS QDTNGRTTSA 120
  121 SQEDNDEKRV KSRYRNMQAD HPRQQPMSVG STSSRNGSSG NSSTSSTSNG LPPPPSVSSI 180
  181 TNNRSYHSSA YPYSSSHTYN NYHHRETPPP PPSNGYYAKG YPVHVPENRS NSDGSSSSVV 240
  241 KKKRILDMKD SPFIYLTDFD KNVKKTNNTE SECEKAREVF KESDSIDSAL EELNLKINSN 300
  301 ELELRLLNNQ CDKHALNIQL TQEKLDSLLL MQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle