| Protein: | VPS16 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 798 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VPS16.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..798] | [1..798] |
|
|
0.0 | [1..768] | [5..805] |
|
|
0.0 | [1..776] | [3..807] |
|
|
0.0 | [1..767] | [3..841] |
|
|
0.0 | [7..775] | [9..835] |
|
|
0.0 | [8..769] | [8..806] |
|
Region A: Residues: [1-432] |
1 11 21 31 41 51
| | | | | |
1 MKNPSFDWER LKDVFYRSRA IGELKWPTQY EEFKCALSLT VIAVEIQDFI QVYNYFGQLL 60
61 GKINLQRIHE DIIKFEFDKD EKLILVTKSS IKIVKGWSPL TIESVPLQDP TIDTIWDYHN 120
121 GIMLLAKSRD IYKLNGNEWE LLYENKDKKY NLLTKNHWSC NDDSIILLDV DHVYQVSTSN 180
181 GALLKLITDS SWHKVTISSR GFICLYNMKD NKLQIFRDPA RILMEHNLDS TPDDICWCGN 240
241 DTVACSFEDE IKLYGPDGLY VTFWYPFTVT NLRAEVDGLK VITTEKIYFL SRVQPQTSNI 300
301 FRIGSTEPGA MLVDSFSLLE DHAPKAIEIL KNFVLEKGVL DCIAAAIDEF EPKLQKMLLN 360
361 AASYGKASLQ YKSFDASIFV NACNTIKLLN CFRSFGIFLT VEEYRCISLK GVIDRLLKYH 420
421 RYYECIQICK LA
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [433-619] |
1 11 21 31 41 51
| | | | | |
1 NERFLLGYVF TEWAKDKIKG SPDMEDDELL DKIKSRLSVI DMTDTLQMVA VAKVAYLEGR 60
61 FQLSRNLALL EKNEEARIEQ LYNLDDDSIA LKECIKVQNY SLTISLLIAL SKKLTNSQLT 120
121 KLLIIDMFNN PLYLYYMRMD KAYLYDFYRQ TDRFIDLAHV LLQQGKEQQS LHSFLPQIKD 180
181 LYSQVQN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [620-798] |
1 11 21 31 41 51
| | | | | |
1 SEVVNNTIEQ LQRQEKLWIY QESLGKRFAI SFTNMTLDQT LSKLIETGQD KQVKEIVKKF 60
61 KISEKKLYHL KCKTLVEAKK FDELLQFAQS RKSPIGYMPF YTYLKSRGHM DKASPYVNMI 120
121 PGLSYQEKKK LYVECRGFRD AIQLAGKEKD IPGLKEIYNI IPPNEPELKA LANETMSRI
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
