YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YPL039W
Organism: Saccharomyces cerevisiae
Length: 316 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YPL039W.

Description E-value Query
Range
Subject
Range
YPL039W - Putative protein of unknown function; YPL039W is not an essential gene
YP039_YEAST - Uncharacterized protein YPL039W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPL039W ...
gi|151942754 - gi|151942754|gb|EDN61100.1| conserved protein [Saccharomyces cerevisiae YJM789]
0.0 [1..316] [1..316]

Back

Predicted Domain #1
Region A:
Residues: [1-316]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKEEYNLSG ADNMASAELS FKKQKVVLKK FMIAQVTKGI MQRYASLLVT MPSDDDNAII  60
   61 GTNHLKTTKF LEIILHRAKS SHLQFKKVCC IVIKFLDCCS KETNYMKFLK FSLHKLFVAA 120
  121 FILSVPNVVG DDRDRITTRD ETYHLYSQIT GLPLEEVINC CSIVRPVLIR RSRQQRRQML 180
  181 SRREQHSYFL RSSFMNSNSS ASPFFSTNRS ADDLHVHTRA YSLHSHSDGE GQDRRSEHEE 240
  241 THSMGADADT YRQTTFIPDT PNGLHSRSLI ECGIEPTQVS DSGEWSGQSN GYVLVTELQE 300
  301 FNKMGKKLVQ EAFRIV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle