Protein: | TRM44 |
Organism: | Saccharomyces cerevisiae |
Length: | 567 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TRM44.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..567] | [1..567] |
|
0.0 | [34..567] | [31..502] |
|
0.0 | [33..561] | [37..507] |
|
0.0 | [178..526] | [127..404] |
|
3.0E-88 | [254..528] | [249..462] |
|
7.0E-88 | [233..528] | [33..265] |
|
1.0E-84 | [233..528] | [188..420] |
Region A: Residues: [1-165] |
1 11 21 31 41 51 | | | | | | 1 MTGDGSAHIS KNNQNQHKDR FKFIVNDKSI LGPQWLSLYQ TDGKVTFAKS HFEQAMMNVI 60 61 REPNINSTVI LRADILKEIN HAAEAGSEPK FDESVLKKFE IDNGNESGEE DVKKINIEDL 120 121 NIRSCETSES LKLSPVHEFV RRIIPRNFYK DAIINQTCLI LNSKD |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [166-567] |
1 11 21 31 41 51 | | | | | | 1 PNFQETSLIV YTPHINSEKD CPFYIPRTQS VGILLHQSVL SVHYIPFPED KTAFTDESER 60 61 VVRTAYRLLQ TANKHSKGVM QGYEKRVNHD QVVNKVNFQN TYIVLKKKYS KFLVENWAES 120 121 TDPKKHVFED IAIAAFLIEL WIKVYGPDFR SKMQFRDLGC GNGALCYILL SESIKGLGID 180 181 ARKRKSWSIY PPEVQSSLKE QVIIPSILLR PHPALKRQVP HLEHNGRFFP VKVTHEVIAP 240 241 ATVVYSSEDL LKSPQVNTAE FPPDTFIIGN HSDELTCWIP LLGHPYMVIP CCSHNFSGQR 300 301 VRFNVRKRSP RSNEIKNQNN SKSTYSGLVD HVEYISSRVG WKVEKEMLRI PSTRNAAIIG 360 361 VENATLKHFP TQAVYDMIWE DGGAEGWIQN TMSLLKRNPR NH |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.