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View Structure Prediction Details

Protein: CTF19
Organism: Saccharomyces cerevisiae
Length: 369 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CTF19.

Description E-value Query
Range
Subject
Range
CTF19 - Outer kinetochore protein, required for accurate mitotic chromosome segregation; component of the ki...
CTF19_YEAST - Central kinetochore subunit CTF19 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CTF19 ...
0.0 [1..369] [1..369]

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Predicted Domain #1
Region A:
Residues: [1-369]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFTSDTTNS HDTSNSHLSL EDAVGTHHAG EADVNIDGDE KQQLSLLDDD QVRALKLQEE  60
   61 KDALLTRRNT LLQEIQTYQN ILMKENNSKT KNGDILQNDI TQDFLNLISI SSSNPNSAIS 120
  121 DRKRVERING LTNLQKELVT KYDTLPLLNM NLRLSYLRDH TYPHLQVSVQ SRDRVHNDGI 180
  181 EVLVVNYKFC RNTMNPFEIQ FKMFYKFEDS TLLKWEILRI STNVRLKAKQ LLATRNFQKC 240
  241 LLSLYEFDKI KSKKTGIFQN LINLLKRKTR CYLMNNSDSL IVERVIREGR LTTIKLQINF 300
  301 IITMPGERGK PRNCFLPMSK ISIALWKGGE RFNQIDLDEI CYGLIKEYGV KTGLKEICNV 360
  361 CLFPDMYAR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle