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View Structure Prediction Details

Protein: YOR376W
Organism: Saccharomyces cerevisiae
Length: 122 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YOR376W.

Description E-value Query
Range
Subject
Range
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
4.0E-61 [1..122] [1..122]

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Predicted Domain #1
Region A:
Residues: [1-122]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNRKFSNLL LLRLRILCFN KKPAFAATSY AFFFRNFSVL IFIMVPDEKE NGAAADNSFS  60
   61 LLIGRGVVLF LFYCPTALKM HGPVPAHWFC DKNIEAIQSD GQIRLLRSGP FPWSHGTCIR 120
  121 GA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.587 c.59.1 MurD-like peptide ligases, peptide-binding domain
View Download 0.587 c.59.1 MurD-like peptide ligases, peptide-binding domain
View Download 0.527 a.118.8 TPR-like
View Download 0.527 a.118.8 TPR-like
View Download 0.411 a.118.1 ARM repeat
View Download 0.411 a.118.1 ARM repeat
View Download 0.369 a.74.1 Cyclin-like
View Download 0.369 a.74.1 Cyclin-like
View Download 0.348 c.58.1 Aminoacid dehydrogenase-like, N-terminal domain
View Download 0.284 a.118.9 ENTH/VHS domain
View Download 0.279 a.11.2 Second domain of FERM
View Download 0.278 c.58.1 Aminoacid dehydrogenase-like, N-terminal domain
View Download 0.275 a.1.1 Globin-like
View Download 0.274 b.18.1 Galactose-binding domain-like
View Download 0.261 c.2.1 NAD(P)-binding Rossmann-fold domains
View Download 0.234 d.93.1 SH2 domain
View Download 0.207 a.118.8 TPR-like
View Download 0.204 c.61.1 PRTase-like

Predicted functions:

Term Confidence Notes
catalytic activity 0.781203015010266 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle