| Protein: | MYO2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1574 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MYO2.
| Description | E-value | Query Range |
Subject Range |
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0.0 | [4..1093] | [147..1170] |
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0.0 | [5..1542] | [9..1515] |
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0.0 | [2..1303] | [31..1358] |
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0.0 | [3..879] | [30..884] |
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0.0 | [2..1327] | [32..1375] |
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0.0 | [2..1327] | [33..1370] |
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0.0 | [2..1364] | [31..1406] |
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0.0 | [6..1205] | [7..1157] |
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Region A: Residues: [1-63] |
1 11 21 31 41 51
| | | | | |
1 MSFEVGTRCW YPHKELGWIG AEVIKNEFND GKYHLELQLE DDEIVSVDTK DLNNDKDQSL 60
61 PLL
|
| Detection Method: |  |
| Confidence: | 2630.0 |
| Match: | 1jwyA_ |
| Description: | Myosin S1 fragment, N-terminal domain; Myosin S1, motor domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [64-342] |
1 11 21 31 41 51
| | | | | |
1 RNPPILEATE DLTSLSYLNE PAVLHAIKQR YSQLNIYTYS GIVLIATNPF DRVDQLYTQD 60
61 MIQAYAGKRR GELEPHLFAI AEEAYRLMKN DKQNQTIVVS GESGAGKTVS AKYIMRYFAS 120
121 VEEENSATVQ HQVEMSETEQ KILATNPIME AFGNAKTTRN DNSSRFGKYL EILFDKDTSI 180
181 IGARIRTYLL ERSRLVYQPP IERNYHIFYQ LMAGLPAQTK EELHLTDASD YFYMNQGGDT 240
241 KINGIDDAKE YKITVDALTL VGITKETQHQ IFKILAALL
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Region B: Residues: [417-452] |
1 11 21 31 41 51
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1 SALFDWLVEN INTVLCNPAV NDQISSFIGV LDIYGF
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Region C: Residues: [653-697] |
1 11 21 31 41 51
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1 ELMNTINSTN VHYIRCIKPN ADKEAWQFDN LMVLSQLRAC GVLET
|
| Detection Method: | |
| Confidence: | 2630.0 |
| Match: | 1jwyA_ |
| Description: | Myosin S1 fragment, N-terminal domain; Myosin S1, motor domain |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [343-416] |
1 11 21 31 41 51
| | | | | |
1 HIGNIEIKKT RNDASLSADE PNLKLACELL GIDAYNFAKW VTKKQIITRS EKIVSNLNYS 60
61 QALVAKDSVA KFIY
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Region B: Residues: [453-483] |
1 11 21 31 41 51
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1 EHFEKNSFEQ FCINYANEKL QQEFNQHVFK L
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Region C: Residues: [498-652] |
1 11 21 31 41 51
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1 IEFNDNQPCI DLIENKLGIL SLLDEESRLP AGSDESWTQK LYQTLDKSPT NKVFSKPRFG 60
61 QTKFIVSHYA LDVAYDVEGF IEKNRDTVSD GHLEVLKAST NETLINILEG LEKAAKKLEE 120
121 AKKLELEQAG SKKPGPIRTV NRKPTLGSMF KQSLI
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|
Region D: Residues: [698-701] |
1 11 21 31 41 51
| | | | | |
1 IRIS
|
| Detection Method: | |
| Confidence: | 2630.0 |
| Match: | 1jwyA_ |
| Description: | Myosin S1 fragment, N-terminal domain; Myosin S1, motor domain |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [484-497] |
1 11 21 31 41 51
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1 EQEEYVKEEI EWSF
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Region B: Residues: [702-783] |
1 11 21 31 41 51
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1 CAGFPSRWTF EEFVLRYYIL IPHEQWDLIF KKKETTEEDI ISVVKMILDA TVKDKSKYQI 60
61 GNTKIFFKAG MLAYLEKLRS NK
|
| Detection Method: | |
| Confidence: | 2630.0 |
| Match: | 1jwyA_ |
| Description: | Myosin S1 fragment, N-terminal domain; Myosin S1, motor domain |
| Matching Structure (courtesy of the PDB): |
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Region A: Residues: [784-844] |
1 11 21 31 41 51
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1 MHNSIVMIQK KIRAKYYRKQ YLQISQAIKY LQNNIKGFII RQRVNDEMKV NCATLLQAAY 60
61 R
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| Detection Method: | |
| Confidence: | 12.522879 |
| Match: | 1wdcA_ |
| Description: | SCALLOP MYOSIN REGULATORY DOMAIN |
Matching Structure (courtesy of the PDB): |
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Region A: Residues: [845-1009] |
1 11 21 31 41 51
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1 GHSIRANVFS VLRTITNLQK KIRKELKQRQ LKQEHEYNAA VTIQSKVRTF EPRSRFLRTK 60
61 KDTVVVQSLI RRRAAQRKLK QLKADAKSVN HLKEVSYKLE NKVIELTQNL ASKVKENKEM 120
121 TERIKELQVQ VEESAKLQET LENMKKEHLI DIDNQKSKDM ELQKT
|
| Detection Method: | |
| Confidence: | 4.0 |
| Match: | 1cii__ |
| Description: | Colicin Ia; Colicin Ia, N-terminal domain |
Matching Structure (courtesy of the PDB): |
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Region A: Residues: [1010-1327] |
1 11 21 31 41 51
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1 IENNLQSTEQ TLKDAQLELE DMVKQHDELK EESKKQLEEL EQTKKTLVEY QTLNGDLQNE 60
61 VKSLKEEIAR LQTAMSLGTV TTSVLPQTPL KDVMGGGASN FNNMMLENSD LSPNDLNLKS 120
121 RSTPSSGNNH IDSLSVDREN GVNATQINEE LYRLLEDTEI LNQEITEGLL KGFEVPDAGV 180
181 AIQLSKRDVV YPARILIIVL SEMWRFGLTK QSESFLAQVL TTIQKVVTQL KGNDLIPSGV 240
241 FWLANVRELY SFVVFALNSI LTEETFKNGM TDEEYKEYVS LVTELKDDFE ALSYNIYNIW 300
301 LKKLQKQLQK KAINAVVI
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| Detection Method: | |
| Confidence: | 4.0 |
| Match: | 1cii__ |
| Description: | Colicin Ia; Colicin Ia, N-terminal domain |
| Matching Structure (courtesy of the PDB): |
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Region A: Residues: [1328-1380] |
1 11 21 31 41 51
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1 SESLPGFSAG ETSGFLNKIF ANTEEYTMDD ILTFFNSIYW CMKSFHIENE VFH
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.390 | d.58.17 | Metal-binding domain |
| View | Download | 0.535 | a.140.1 | LEM domain |
| View | Download | 0.445 | a.32.1 | Transcription factor IIA (TFIIA), alpha-helical domain |
| View | Download | 0.373 | d.58.48 | MTH1187-like |
| View | Download | 0.368 | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.367 | a.5.2 | UBA-like |
| View | Download | 0.351 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.337 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.325 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.296 | a.6.1 | Putative DNA-binding domain |
| View | Download | 0.294 | d.58.11 | EF-G/eEF-2 domains III and V |
| View | Download | 0.274 | a.4.1 | Homeodomain-like |
| View | Download | 0.270 | a.64.1 | Saposin |
| View | Download | 0.264 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.234 | a.140.3 | Rho termination factor, N-terminal domain |
| View | Download | 0.234 | d.58.23 | Probable ACP-binding domain of malonyl-CoA ACP transacylase |
| View | Download | 0.230 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.229 | a.4.1 | Homeodomain-like |
| View | Download | 0.221 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.212 | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.212 | a.10.1 | Protozoan pheromone proteins |
| View | Download | 0.210 | a.22.1 | Histone-fold |
| View | Download | 0.209 | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.208 | g.34.1 | HIV-1 VPU cytoplasmic domain |
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Region A: Residues: [1381-1509] |
1 11 21 31 41 51
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1 AVVTTLLNYV DAICFNELIM KRNFLSWKRG LQLNYNVTRL EEWCKTHGLT DGTECLQHLI 60
61 QTAKLLQVRK YTIEDIDILR GICYSLTPAQ LQKLISQYQV ADYESPIPQE ILRYVADIVK 120
121 KEAALSSSG
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| Detection Method: | |
| Confidence: | 46.657577 |
| Match: | PF01843 |
| Description: | DIL domain |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
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Region A: Residues: [1510-1574] |
1 11 21 31 41 51
| | | | | |
1 NDSKGHEHSS SIFITPETGP FTDPFSLIKT RKFDQVEAYI PAWLSLPSTK RIVDLVAQQV 60
61 VQDGH
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.681 | 0.945 | microfilament motor activity | a.39.1 | EF-hand |
| View | Download | 0.455 | 0.945 | microfilament motor activity | a.4.1 | Homeodomain-like |
| View | Download | 0.430 | 0.945 | microfilament motor activity | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.745 | 0.945 | microfilament motor activity | a.50.1 | Anaphylotoxins (complement system) |
| View | Download | 0.443 | 0.945 | microfilament motor activity | a.4.1 | Homeodomain-like |
| View | Download | 0.430 | 0.945 | microfilament motor activity | b.84.2 | Rudiment single hybrid motif |
| View | Download | 0.383 | 0.945 | microfilament motor activity | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.358 | 0.945 | microfilament motor activity | a.60.1 | SAM/Pointed domain |
| View | Download | 0.333 | 0.945 | microfilament motor activity | a.3.1 | Cytochrome c |
| View | Download | 0.317 | 0.945 | microfilament motor activity | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.313 | 0.945 | microfilament motor activity | a.101.1 | Uteroglobin-like |
| View | Download | 0.301 | 0.945 | microfilament motor activity | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.300 | 0.945 | microfilament motor activity | a.3.1 | Cytochrome c |
| View | Download | 0.300 | 0.945 | microfilament motor activity | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.290 | 0.945 | microfilament motor activity | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.280 | 0.945 | microfilament motor activity | a.112.1 | Description not found. |
| View | Download | 0.277 | 0.945 | microfilament motor activity | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.276 | 0.945 | microfilament motor activity | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.276 | 0.945 | microfilament motor activity | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.275 | 0.945 | microfilament motor activity | a.4.1 | Homeodomain-like |
| View | Download | 0.274 | 0.945 | microfilament motor activity | a.39.1 | EF-hand |
| View | Download | 0.263 | 0.945 | microfilament motor activity | a.60.4 | DNA repair protein Rad51, N-terminal domain |
| View | Download | 0.262 | 0.945 | microfilament motor activity | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.259 | 0.945 | microfilament motor activity | a.140.2 | SAP domain |
| View | Download | 0.252 | 0.945 | microfilament motor activity | a.60.11 | Hypothetical protein YjbJ |
| View | Download | 0.251 | 0.945 | microfilament motor activity | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.237 | 0.945 | microfilament motor activity | a.144.1 | PABC (PABP) domain |
| View | Download | 0.235 | 0.945 | microfilament motor activity | a.60.8 | HRDC-like |
| View | Download | 0.234 | 0.945 | microfilament motor activity | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.228 | 0.945 | microfilament motor activity | d.192.1 | YlxR-like |
| View | Download | 0.225 | 0.945 | microfilament motor activity | a.64.1 | Saposin |
| View | Download | 0.224 | 0.945 | microfilament motor activity | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.223 | 0.945 | microfilament motor activity | a.4.1 | Homeodomain-like |
| View | Download | 0.220 | 0.945 | microfilament motor activity | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.219 | 0.945 | microfilament motor activity | a.39.1 | EF-hand |
| View | Download | 0.214 | 0.945 | microfilament motor activity | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.208 | 0.945 | microfilament motor activity | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.207 | 0.945 | microfilament motor activity | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.206 | 0.945 | microfilament motor activity | a.118.9 | ENTH/VHS domain |
| View | Download | 0.205 | 0.945 | microfilament motor activity | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.204 | 0.945 | microfilament motor activity | a.140.4 | Recombination endonuclease VII, C-terminal and dimerization domains |
| View | Download | 0.200 | 0.945 | microfilament motor activity | a.60.5 | Barrier-to-autointegration factor, BAF |
