| Protein: | FRT1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 602 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FRT1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..602] | [1..602] |
|
|
6.0E-31 | [88..574] | [1693..2169] |
|
|
2.0E-28 | [91..558] | [1251..1703] |
|
|
7.0E-28 | [88..558] | [1247..1698] |
|
|
3.0E-27 | [81..572] | [1212..1718] |
|
|
2.0E-26 | [188..565] | [809..1170] |
|
Region A: Residues: [1-154] |
1 11 21 31 41 51
| | | | | |
1 MNLLIDRMEN PGSRNCTLLP PSFPRGFCKG RRASSGDAVK IKESGLQPQP QPEPLQAKTN 60
61 VAHFSKSSSR LPVIAVNDNP VVPRPSTEVN LGSLLQKERE KEKEEQPALH DRRHLYVTKN 120
121 RAHGVRQRSL EMTSLPVLGS TKTGKFSDFL FEDD
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [155-602] |
1 11 21 31 41 51
| | | | | |
1 IDNRVGRHSR SYSGASSLDD PFRVSPKTDF NSNRARLSCL SKGRRGSMSV FQSCHTGLAF 60
61 NQIQGSSSSQ RRSSAGSFDY ERKRLVNQFL QPSLGNSDPF DTLRESVVFE PSSTAGGIKL 120
121 GNMHSQSQIS VNSSPSTSLF YHDLDGSAVN DSSSFLYSRS NVPAFLSSSA FSSTSSTSSD 180
181 SEDVDRRSLN GVYPSLGYLT NQRKPRNSSG SSTAPGTDTL GFKYLLNRQK SADSSTRFKS 240
241 VLKVNNNNGS AATPDSSSNS ISKSNSNLND NIDELNYYQN HISTLLVKIE NEMRRNLNDT 300
301 IIKNENNVQK TIQKYDLLSG ELTLLLDEMT TLRTTVINQF LVKLKSDFDE DDNKAFINEL 360
361 KISVEESVAQ LQGLERRMEV CQERLNKQKS SLREMDSLIE LKNVLNKSKN NTKSIYLYRY 420
421 FIIDIIAFLL MGGFIVYVKN LLTRFFTR
|
| Detection Method: | |
| Confidence: | 25.30103 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
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