Protein: | RFM1 |
Organism: | Saccharomyces cerevisiae |
Length: | 310 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RFM1.
Description | E-value | Query Range |
Subject Range |
|
182.0 | [0..7] | [306..2] |
|
151.0 | [0..15] | [302..51] |
|
142.0 | [0..20] | [302..78] |
Region A: Residues: [1-68] |
1 11 21 31 41 51 | | | | | | 1 MSTNTEIIKN SDLQSLINDK RRLINEIKDF NKSIKPLEFE SYQDYFLIKT FKKGISASGH 60 61 VDIDSLRN |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.739 | a.239.1 | Description not found. |
View | Download | 0.710 | a.74.1 | Cyclin-like |
View | Download | 0.710 | a.74.1 | Cyclin-like |
View | Download | 0.707 | a.239.1 | Description not found. |
View | Download | 0.546 | a.4.5 | "Winged helix" DNA-binding domain |
View | Download | 0.546 | a.4.5 | "Winged helix" DNA-binding domain |
View | Download | 0.497 | a.77.1 | DEATH domain |
View | Download | 0.497 | a.77.1 | DEATH domain |
View | Download | 0.457 | a.77.1 | DEATH domain |
Region A: Residues: [69-310] |
1 11 21 31 41 51 | | | | | | 1 KEYGIYYKKI KRNSTQEVGE PIPRNTSSSS SSTRSNSSAD ISDTEYSGEN TPTTTGAASR 60 61 RRRTRSRAIQ RENSLPASLP SISEANANND DVTISEINGS ELPFPIPISE VENIDIASDI 120 121 TERDGIRRRS SRISERDKRR SQSRLGSEED EEGDGHDGDE GETKIQDLYE SLVPKILESR 180 181 RRSDWILPPK ARYTPEKQMR TKPSFKSIKI NELVGNKRIR SILSRFEGGV AGIRKRDWDS 240 241 TQ |