| Protein: | NFI1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 726 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NFI1.
| Description | E-value | Query Range |
Subject Range |
|
|
569.0 | [0..29] | [515..69] |
|
|
557.0 | [0..35] | [515..3] |
|
|
551.0 | [0..35] | [515..3] |
|
|
550.0 | [0..35] | [515..3] |
|
|
549.0 | [0..35] | [515..3] |
|
|
546.0 | [0..42] | [515..1] |
|
Region A: Residues: [1-96] |
1 11 21 31 41 51
| | | | | |
1 MASVMSNNNN NNNNNNASYM FTNPLSNTGG GLINEIKDAI NEMEQLKVLE LKQICKSLDL 60
61 SITGKKAVLQ DRIKQFLRKS CDIGHIDPWR PKAIKI
|
| Detection Method: |  |
| Confidence: | 12.154902 |
| Match: | PF02037 |
| Description: | SAP domain |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.607 | N/A | N/A | d.240.1 | Description not found. |
| View | Download | 0.564 | N/A | N/A | d.240.1 | Description not found. |
| View | Download | 0.449 | N/A | N/A | d.240.1 | Description not found. |
| View | Download | 0.417 | N/A | N/A | c.103.1 | Hypothetical protein MT938 (MTH938) |
| View | Download | 0.396 | N/A | N/A | a.42.1 | MDM2 |
| View | Download | 0.337 | N/A | N/A | a.41.1 | Domain of poly(ADP-ribose) polymerase |
| View | Download | 0.307 | N/A | N/A | a.64.1 | Saposin |
| View | Download | 0.269 | N/A | N/A | a.64.1 | Saposin |
| View | Download | 0.266 | N/A | N/A | a.41.1 | Domain of poly(ADP-ribose) polymerase |
| View | Download | 0.256 | N/A | N/A | a.42.1 | MDM2 |
|
Region A: Residues: [97-325] |
1 11 21 31 41 51
| | | | | |
1 LIAKVRINSS LPKYSTLWET LKTGAFKHPV ASGQLPVTAL QSTALPPYSQ QQALAYSFTS 60
61 PFYKPIVQIP DANKKLKQSA GRGCTKMKFK VSKSNHDLLK SNKSYKLYLF SGFSIPFIYE 120
121 TVGHEAIDFP YPCELVFNGT KLEDNVKGLK KQNGTGNPAN LTPYLKVPTE MNHLDLHYLN 180
181 IDKEYSISCF IVEVFSPEAL LGKILKRPKI IKQATTAYIK RTLNEQDDD
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [326-387] |
1 11 21 31 41 51
| | | | | |
1 DIITTSTVLS LQCPISCTRM KYPAKTDQCK HIQCFDALWF LHSQSQVPTW QCPICQHPIK 60
61 FD
|
| Detection Method: | |
| Confidence: | 34.080922 |
| Match: | PF02891 |
| Description: | MIZ zinc finger |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.842 | N/A | N/A | d.15.7 | Immunoglobulin-binding domains |
| View | Download | 0.842 | N/A | N/A | d.15.7 | Immunoglobulin-binding domains |
| View | Download | 0.701 | N/A | N/A | d.10.1 | DNA-binding domain |
| View | Download | 0.686 | N/A | N/A | d.15.7 | Immunoglobulin-binding domains |
| View | Download | 0.679 | N/A | N/A | d.375.1 | Description not found. |
| View | Download | 0.663 | N/A | N/A | d.15.7 | Immunoglobulin-binding domains |
| View | Download | 0.663 | N/A | N/A | d.15.7 | Immunoglobulin-binding domains |
| View | Download | 0.658 | N/A | N/A | d.10.1 | DNA-binding domain |
| View | Download | 0.655 | N/A | N/A | d.10.1 | DNA-binding domain |
|
Region A: Residues: [388-726] |
1 11 21 31 41 51
| | | | | |
1 QLKISEFVDN IIQNCNEDVE QVEISVDGSW KPIHNSSAVI TDTVNQNHSV KNENQGTVKQ 60
61 EQDYDSRNAF DTNLRNGSNH NEPEIISLDS SDDEAFIPAS KSFPTHVNPR NDQLRADIFP 120
121 SESEGSSDYN PNHTSTPKGS PTMDQDNYQD AFQMRSFLNQ GATTNINDTP TNNSSINSFV 180
181 TATNGDSRIF YNRGPSTPLL PAVLQNLTNQ TEAQRNPYGP NYNTTAQDRN LLGIEGDLPP 240
241 IPPVDPNSEA ETELPTRTTS AAHLPPYIHV STSGHGDDGK IRKRRHSNVS IYIPKNPYAT 300
301 LMKRRPQANH AIMNKTLAQT NDFNTSAQDN SEVVDLTSD
|
| Detection Method: | |
| Confidence: | 12.93 |
| Match: | |
| Description: | No description for 1i3qA was found. |
