| Protein: | MDM32 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 653 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MDM32.
| Description | E-value | Query Range |
Subject Range |
|
|
970.0 | [0..32] | [653..1] |
|
|
513.0 | [0..121] | [556..84] |
|
|
513.0 | [0..121] | [556..84] |
|
|
502.0 | [0..45] | [652..4] |
|
|
480.0 | [0..121] | [652..112] |
|
|
470.0 | [0..103] | [636..74] |
|
|
470.0 | [0..116] | [539..94] |
|
|
419.0 | [0..95] | [556..78] |
|
|
409.0 | [0..118] | [649..62] |
|
Region A: Residues: [1-105] |
1 11 21 31 41 51
| | | | | |
1 MHIKVDSRFA SRSIKTKGTY RLSGGGRFIK FMLITRLRVP TIKRPLLPIT SHLVRHCIRT 60
61 YVATNHGNVR PFITPYKSSL PVRCLIAQRH IRTFPSNDKF TTKAS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.688 | d.224.1 | SufE-like |
| View | Download | 0.638 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.638 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.626 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.584 | a.4.1 | Homeodomain-like |
| View | Download | 0.574 | a.4.1 | Homeodomain-like |
| View | Download | 0.523 | a.4.12 | TrpR-like |
| View | Download | 0.520 | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.475 | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.437 | d.189.1 | PX domain |
|
Region A: Residues: [106-542] |
1 11 21 31 41 51
| | | | | |
1 NIETILLRKN NEREFKQSLL ADAKNFQERF KINLKWILIK NNRPFSLNEI SIIASWLILS 60
61 QILWLILSTT TFISFYLFVI NSVFSQEYIH EKKIYERLLK WLLKDHKCSN QDLEITFSPE 120
121 DKASMLVLSP DWESNSILIK RLNVRDEILD LDLKFHHINL NVSLKNWLLG RGLITNVSIY 180
181 GIRGCLNLSN FINLVNSFQG DQKTENFLKT LNNVEITDSE ILLKQSLSAQ ETPSLKFSIY 240
241 NLSLPRLRLN HFISDILSAK TFSGSINNSL FNLFKRQQKL TAVIENNNKN RMASSKFDFT 300
301 DNNQENYRTV THQDDPNYVT TLRLNFININ DLKFNGDGKF NWLKDGQVEI LADIMLTNST 360
361 SHLSSESKYA VVDLKVTCRD LKTTFPQEPP VLSTGDSIVS LDELKPIITF INSYEGMANP 420
421 ILKDFSENER LTNSIIW
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [543-653] |
1 11 21 31 41 51
| | | | | |
1 NSPNVSINRQ RKSYPLTTKV TSNSTKEIIK FHNQPNTNAN EIVLRCKMVK NLSDLQLINI 60
61 NQILDQITME LYVDLTKIVE DWEFKNKNDW MKQWGTTFAS QLLLFGFGAM V
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.888 | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.880 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.848 | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.775 | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.775 | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.738 | a.7.7 | BAG domain |
| View | Download | 0.723 | a.7.8 | GAT domain |
| View | Download | 0.718 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.627 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.595 | a.29.2 | Bromodomain |
