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View Structure Prediction Details

Protein: WHI2
Organism: Saccharomyces cerevisiae
Length: 486 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for WHI2.

Description E-value Query
Range
Subject
Range
WHI2_YEAST - Growth regulation protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=WHI2 PE=1 SV=2
WHI2 - Protein required, with binding partner Psr1p, for full activation of the general stress response, po...
0.0 [1..486] [1..486]
YOFG_SCHPO - WHI2-like protein P4H10.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBP4H10.16c P...
SPBP4H10.16c - phosphatase activator
6.0E-87 [41..300] [27..230]

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Predicted Domain #1
Region A:
Residues: [1-309]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDIITQVSP DNAESAPILQ EQQQQQNSQY EGNEEDYGDS LIHLNIQENH YFITRDQLMS  60
   61 LPESLLLCLF PSGVFLDRCG QVITNLTRDD EVYIVNFPPD CFEYIMEIYT KAHDDLYNHP 120
  121 VEKFFDRPSS SFVSNAKGFF GLSSNNSISS NNEQDILHQK PAIIVLREDL DYYCVPQEEF 180
  181 QFDSTNEENN EDLLRHFMAQ VKMAAGSYLT SKTSIFQGLY SSNRLKQQQQ QQKIEKGSNS 240
  241 SSNTKSTSKK LGPAEQHLMD MLCSSGFTKE TCWGNRTQET GKTVISSLSL CRLANETTEG 300
  301 FRQKFNEAK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [310-486]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AKWEAEHKPS QDNFITPMQS NISINSLSAS KSNSTISTAR NLTSGSTAPA TARDKRKSRL  60
   61 SKLADNVRSH SSSRHSSQTR SKPPELPKLY DLVPKPNINA KLLLFWRKPA RKCWWGEEDI 120
  121 ELEVEVFGSW KDESKKIIEL ILPTNVDPEA ELHKIIVPVR LHIRRVWTLE LSVIGVQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [313-391]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EAEHKPSQDN FITPMQSNIS INSLSASKSN STISTARNLT SGSTAPATAR DKRKSRLSKL  60
   61 ADNVRSHSSS RHSSQTRSK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [392-486]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPELPKLYDL VPKPNINAKL LLFWRKPARK CWWGEEDIEL EVEVFGSWKD ESKKIIELIL  60
   61 PTNVDPEAEL HKIIVPVRLH IRRVWTLELS VIGVQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle