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View Structure Prediction Details

Protein: AHC1
Organism: Saccharomyces cerevisiae
Length: 566 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AHC1.

Description E-value Query
Range
Subject
Range
AHC1 - Subunit of the Ada histone acetyltransferase complex, required for structural integrity of the compl...
AHC1_YEAST - Protein AHC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AHC1 PE=1 SV=1
0.0 [1..566] [1..566]

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Predicted Domain #1
Region A:
Residues: [1-261]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSPAQDKLQ HQHHNPNSSS SSSSKMTNVY QVTTPKSPQD LENNMDEPFK MDTATSNPDK  60
   61 DSENTQRLKY ECAKGEIQNV LNLHIMLNHK HVRHLRRNVQ KVNAKLALLE TLHKDTGLLN 120
  121 KIERTYQLKI KQHQQHSVLG GHFHDSTATE NTNASNYNLS YPVLSDYNIN CQPLSSSSNR 180
  181 NLSTTRIPHH HYHTRSKSNG LLLEPSALRP ANSNIIDYRL TGSKSLSEAI TKPTPVSLPH 240
  241 SNSDGISSPR SSSISPLDEQ P

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [262-566]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GFQILPFKPS QMHLNHRRNY SSTCLTSNSG IIGKTENNEP IFRRYDGILV IITCSKCDRS  60
   61 GFTSAQGIVN HTRLKHSKLY SSQPLAVLNN QKLLPNDKQD PEILSKFKKL NLDPNKDYLP 120
  121 SDIAIPKPQS PINHSENHTR APKTVKNTPH LEKLYQNKED FKKLIDMVNE TPDDLNEYLK 180
  181 QREIQLRYQK EQEEESSKSD DEASYVPSPS LSATATTTTT TDPPSPPVLS SSLQRKLLRK 240
  241 RKLSLNSSTP MEDLPLRERL RANPTDKKPR KAALLTNELE GPDPAAKSSS YYNLRSKSRL 300
  301 RGSHT

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 10.71
Match: 1ldvA
Description: No description for 1ldvA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle