YRC Public Data Repository - Protein Structure Prediction

Protein:	YOR012W
Organism:	Saccharomyces cerevisiae
Length:	137 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YOR012W.

Description	E-value	Query Range	Subject Range
YDR391C - Putative protein of unknown function, possibly involved in zinc homeostasis; Bdf1p-dependent transcr... YD391_YEAST - Uncharacterized protein YDR391C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDR391C ... gi\|207346355 - gi\|207346355\|gb\|EDZ72876.1\| YDR391Cp-like protein [Saccharomyces cerevisiae AWRI1631]	178.0	[0..14]	[114..24]
gi\|49528727, gi\|... - gi\|50294003\|ref\|XP_449413.1\| hypothetical protein CAGL0M01562g [Candida glabrata CBS138], gi\|4952872... gi\|49528727 - gi\|49528727\|emb\|CAG62389.1\| unnamed protein product [Candida glabrata]	144.0	[0..10]	[113..2]
gi\|50305955, gi\|... - gi\|50305955\|ref\|XP_452938.1\| unnamed protein product [Kluyveromyces lactis], gi\|49642071\|emb\|CAH0178... gi\|49642071 - gi\|49642071\|emb\|CAH01789.1\| KLLA0C16511p [Kluyveromyces lactis]	129.0	[0..3]	[113..15]

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Predicted Domain #1

Region A:
Residues: [1-137]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVASSINEES SLAVNLTSDV EKASKTLFKA FEKSYANDYL MKKFFHIPIT EKVSRARINA  60
   61 MIHYYTTCYH DLDGEIAEAN DFDAVAIWSR PGCHLPATLS DDESFNKIFF SRLDCEEARS 120
  121 HASGNGLLLP LCHRKRS

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

		MCM Score	SCOP Match	SCOP Description
View	Download	0.353	a.39.1	EF-hand
View	Download	0.341	b.6.1	Cupredoxins
View	Download	0.329	a.8.6	Description not found.
View	Download	0.302	a.118.20	Description not found.
View	Download	0.261	d.81.2	Description not found.
View	Download	0.221	a.77.1	DEATH domain

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits