YRC Public Data Repository - Protein Structure Prediction

Protein:	YOL163W
Organism:	Saccharomyces cerevisiae
Length:	169 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YOL163W.

Description	E-value	Query Range	Subject Range
gi\|9719374 - gi\|9719374\|gb\|AAF97769.1\| membrane glycoprotein HP59 [Homo sapiens]	1.0E-27	[1..168]	[184..340]
S17A5_SHEEP - Sialin OS=Ovis aries GN=SLC17A5 PE=2 SV=1	3.0E-27	[1..168]	[143..299]
CG4330-PA, FBpp0... - This gene is referred to in FlyBase by the symbol Dmel\CG4330 (CG4330, FBgn0030452). It is a protein...	8.0E-27	[1..165]	[177..355]
VGLU2_RAT - Vesicular glutamate transporter 2 OS=Rattus norvegicus GN=Slc17a6 PE=1 SV=1	2.0E-26	[1..168]	[159..320]
gi\|17429372 - gi\|17429372\|emb\|CAD16059.1\| probable permease transmembrane protein [Ralstonia solanacearum GMI1000] gi\|17547071 - gi\|17547071\|ref\|NP_520473.1\| permease transmembrane protein [Ralstonia solanacearum GMI1000]	4.0E-25	[1..168]	[106..267]
PICO_DROAN - Putative inorganic phosphate cotransporter OS=Drosophila ananassae GN=Picot PE=3 SV=1	4.0E-25	[1..167]	[97..257]
gi\|229894922, gi... - gi\|229894922\|ref\|ZP_04510100.1\| putative integral membrane protein [Yersinia pestis Pestoides A], gi... gi\|229694002, gi... - gi\|229897665\|ref\|ZP_04512821.1\| putative integral membrane protein [Yersinia pestis biovar Orientali... gi\|229688600, gi... - gi\|229898310\|ref\|ZP_04513457.1\| putative integral membrane protein [Yersinia pestis biovar Orientali... gi\|167056164, gi... - gi\|167424977\|ref\|ZP_02316730.1\| transporter, major facilitator family [Yersinia pestis biovar Mediae... gi\|166962059, gi... - gi\|167420364\|ref\|ZP_02312117.1\| transporter, major facilitator family [Yersinia pestis biovar Orient... gi\|167467739 - gi\|167467739\|ref\|ZP_02332443.1\| transporter, major facilitator family protein [Yersinia pestis FV-1] gi\|165913807, gi... - gi\|89102527\|ref\|ZP_01175154.1\| COG0477: Permeases of the major facilitator superfamily [Yersinia pes... gi\|166010770, gi... - gi\|166010770\|ref\|ZP_02231668.1\| transporter, major facilitator family [Yersinia pestis biovar Antiqu... gi\|108807591, gi... - gi\|108807591\|ref\|YP_651507.1\| putative integral membrane protein [Yersinia pestis Antiqua], gi\|10877... gi\|165920648, gi... - gi\|165927382\|ref\|ZP_02223214.1\| transporter, major facilitator family [Yersinia pestis biovar Orient... gi\|108811867, gi... - gi\|229902169\|ref\|ZP_04517290.1\| putative integral membrane protein [Yersinia pestis Nepal516], gi\|22... gi\|167049621, gi... - gi\|167400768\|ref\|ZP_02306274.1\| transporter, major facilitator family [Yersinia pestis biovar Antiqu... gi\|166208316, gi... - gi\|166211136\|ref\|ZP_02237171.1\| transporter, major facilitator family [Yersinia pestis biovar Antiqu... gi\|25510657 - pir\|\|AG0272 probable integral membrane protein YPO2237 [imported] - Yersinia pestis (strain CO92) gi\|149292257, gi... - gi\|149365844\|ref\|ZP_01887879.1\| putative integral membrane protein [Yersinia pestis CA88-4125], gi\|1... gi\|45441835, gi\|... - gi\|45441835\|ref\|NP_993374.1\| putative integral membrane protein [Yersinia pestis biovar Microtus str... gi\|77636254, gi\|... - gi\|77636254\|ref\|ZP_00798330.1\| COG0477: Permeases of the major facilitator superfamily [Yersinia pes... gi\|145209891, gi... - gi\|145598195\|ref\|YP_001162271.1\| integral membrane protein [Yersinia pestis Pestoides F], gi\|1452098... gi\|22125968, gi\|... - gi\|22125968\|ref\|NP_669391.1\| transport protein [Yersinia pestis KIM], gi\|21958911\|gb\|AAM85642.1\|AE01... gi\|16122465, gi\|... - gi\|218929333\|ref\|YP_002347208.1\| putative integral membrane protein [Yersinia pestis CO92], gi\|16122...	1.0E-24	[1..168]	[100..261]

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Predicted Domain #1

Region A:
Residues: [1-169]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIAWSLVATL QCKMTGKSSF YTCRALMGLF EGGFVADLVL WMSYFYSSSE LSIRLSFFWV  60
   61 TLSLTQIITS IVAFGVFHMR GIGGMAGWQW LFLIERIFTL VIGISAYFLM VPSVVQTKKP 120
  121 WSKKGWFTER EEKIIVNKIL RDDPTKGDMN NRQGMSLKML WQGITDYYI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	7.30103
Match:	1ja5A_
Description:	No description for 1ja5A_ was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits