Protein: | SPT20 |
Organism: | Saccharomyces cerevisiae |
Length: | 604 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPT20.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..582] | [1..582] |
|
0.005 | [176..348] | [89..245] |
Region A: Residues: [1-604] |
1 11 21 31 41 51 | | | | | | 1 MSANSPTGND PHVFGIPVNA TPSNMGSPGS PVNVPPPMNP AVANVNHPVM RTNSNSNANE 60 61 GTRTLTREQI QQLQQRQRLL LQQRLLEQQR KQQALQNYEA QFYQMLMTLN KRPKRLYNFV 120 121 EDADSILKKY EQYLHSFEFH IYENNYKICA PANSRLQQQQ KQPELTSDGL ILTKNNETLK 180 181 EFLEYVARGR IPDAIMEVLR DCNIQFYEGN LILQVYDHTN TVDVTPKENK PNLNSSSSPS 240 241 NNNSTQDNSK IQQPSEPNSG VANTGANTAN KKASFKRPRV YRTLLKPNDL TTYYDMMSYA 300 301 DNARFSDSIY QQFESEILTL TKRNLSLSVP LNPYEHRDML EETAFSEPHW DSEKKSFIHE 360 361 HRAESTREGT KGVVGHIEER DEFPQHSSNY EQLMLIMNER TTTITNSTFA VSLTKNAMEI 420 421 ASSSSNGVRG ASSSTSNSAS NTRNNSLANG NQVALAAAAA AAAVGSTMGN DNNQFSRLKF 480 481 IEQWRINKEK RKQQALSANI NPTPFNARIS MTAPLTPQQQ LLQRQQQALE QQQNGGAMKN 540 541 ANKRSGNNAT SNNNNNNNNL DKPKVKRPRK NAKKSESGTP APKKKRMTKK KQSASSTPSS 600 601 TTMS |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.