Protein: | MDM20 |
Organism: | Saccharomyces cerevisiae |
Length: | 796 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MDM20.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..796] | [1..796] |
|
0.0 | [18..532] | [25..550] |
|
0.0 | [17..542] | [27..593] |
|
0.0 | [40..542] | [12..537] |
|
0.0 | [116..542] | [1..486] |
|
0.0 | [30..542] | [26..632] |
Region A: Residues: [1-587] |
1 11 21 31 41 51 | | | | | | 1 MSDKIQEEIL GLVSRSNFKQ CYAKLGQLQK QFPNALYFKI LETYVKFKQS PGKFDYNKLL 60 61 EEPYGLKGTT ITGDTRSLEF LHNFFVELGK YDEALHVYER GNFKFPSYEL SYHWFMKALE 120 121 DSNYNQMSKA SLQLAKYSDS GNLPKRAYYF WNAISILAVS RFQENTLSDP KKILLSRLAR 180 181 QSLLDLKPFQ NVQEIIVYCL VLDELFPQSR EISEEIVAIT FANFDTSVNL YLKNFILKHT 240 241 KLLNSPQKLF EVCSKLIEKG LDDYELITNL IDAAYKLSKS KDEVKQWIDE NLGDSRNTRL 300 301 ARLKLDIMYT DSVSESSLSY YLSKYHNKPC CSIDLNHYSG HINIDMLKSI MSKYDPEDKD 360 361 LIHHCNILEL GLIGSDSINN YNKFKGTLEK KSVTDYSSCS TFLLEIVKDK CKKTNPELKD 420 421 VLLCITILEN YQAKDPHNFD TMCWLIVLYM YLGLVPDAYF HFINLKIKNV QTDSLDYMIF 480 481 SRFSTLFPNK QSDFYSKTFH EHNNLYDTSL ANLPRYIQVA FERNSYSKIL GMLEMRDKLM 540 541 KSYTRWTKTL ENLQFSRLCN DKRGHLLQKL HEDWRSLEMT QSVSFSD |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [588-796] |
1 11 21 31 41 51 | | | | | | 1 NRDFSILDEN FAQFLNRGKI LEYANLNEES IFLTLIRELI IEALPNGEKT EQISALLKKL 60 61 PSINLEELLN NNLTEVESAS FLIFFEIYEN NGKNLHDLIS RLMKVPINAK QNWMVSHTYL 120 121 TKMATLKTLD SLKRIKDKEI QKLIKNSLKE LRSCCDDVFK GYSKALVQAY EELKKDECGN 180 181 LLKELDVKAE NVKNIKNSLL GIQKSVRNL |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [661-796] |
1 11 21 31 41 51 | | | | | | 1 TEVESASFLI FFEIYENNGK NLHDLISRLM KVPINAKQNW MVSHTYLTKM ATLKTLDSLK 60 61 RIKDKEIQKL IKNSLKELRS CCDDVFKGYS KALVQAYEEL KKDECGNLLK ELDVKAENVK 120 121 NIKNSLLGIQ KSVRNL |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.971 | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |