| Protein: | THP1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 455 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for THP1.
| Description | E-value | Query Range |
Subject Range |
|
|
371.0 | [0..72] | [424..70] |
|
|
371.0 | [0..72] | [424..70] |
|
|
368.0 | [0..72] | [424..71] |
|
Region A: Residues: [1-107] |
1 11 21 31 41 51
| | | | | |
1 MDMANQLLDE LAHGNFSHLT LNLSQNGREI AILQKQLTGF DDKQLETFVE QHPAMPNDTR 60
61 FKIMCTSFLN YARDVDPWSA WSSSDLIFEF YQCLINCLIN DNAPHIE
|
| Detection Method: |  |
| Confidence: | 7.27 |
| Match: | |
| Description: | No description for 1hz4A was found. |
|
Region A: Residues: [108-224] |
1 11 21 31 41 51
| | | | | |
1 MLIPVATRET EFIINLAGKL DSFHLQLHTR SHQFLSHISS ILSRLFNSIK PPRGNASSTN 60
61 IPGKQRILLY LVNKLNNIYF RIESPQLCSN IFKNFQPKSM LAHFNEYQLD QQIEYRY
|
| Detection Method: | |
| Confidence: | 7.27 |
| Match: | |
| Description: | No description for 1hz4A was found. |
|
Region A: Residues: [225-380] |
1 11 21 31 41 51
| | | | | |
1 LLGRYYLLNS QVHNAFVQFN EAFQSLLNLP LTNQAITRNG TRILNYMIPT GLILGKMVKW 60
61 GPLRPFLSQE TIDNWSVLYK HVRYGNIQGV SLWLRQNERH LCARQLLIVL LEKLPMVTYR 120
121 NLIKTVIKSW TTEWGQNKLP YSLIERVLQL SIGPTF
|
| Detection Method: | |
| Confidence: | 7.27 |
| Match: | |
| Description: | No description for 1hz4A was found. |
|
Region A: Residues: [381-455] |
1 11 21 31 41 51
| | | | | |
1 EDPGAQEITI YNGIHSPKNV ENVLVTLINL GLLRANCFPQ LQLCVVKKTT MIQEIVPPVN 60
61 ERITKMFPAH SHVLW
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.791 | N/A | N/A | a.190.1 | Description not found. |
| View | Download | 0.753 | N/A | N/A | d.68.8 | Description not found. |
| View | Download | 0.652 | N/A | N/A | a.190.1 | Description not found. |
| View | Download | 0.529 | N/A | N/A | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.521 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.512 | N/A | N/A | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.487 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.447 | N/A | N/A | d.29.1 | Ribosomal protein L31e |
| View | Download | 0.427 | N/A | N/A | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
