| Protein: | AIM39 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 395 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AIM39.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..395] | [1..395] |
|
Region A: Residues: [1-133] |
1 11 21 31 41 51
| | | | | |
1 MWGLCKKHFP SNKIQVQERN KALKPKKSGS EHKTKQLFPV FNCKKKEKGV MIRFAILRNA 60
61 NTSLLSARSI CLFTQAPTYC HVRLNTLNKS ITTKRNSLTE SKRHVHDGKH FFTTPHQQQQ 120
121 TKLGEIEEGH SPN
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.214 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.214 | N/A | N/A | a.39.1 | EF-hand |
|
Region A: Residues: [134-206] |
1 11 21 31 41 51
| | | | | |
1 IKGEDLRSIG QAITHQRNKR RKQIWSAIFG GIFGVILGYS LIYRVIYLKE QSFLPLFPSS 60
61 KIRKLSTRDL KKV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.647 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.647 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.638 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.638 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.633 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.621 | a.22.1 | Histone-fold |
| View | Download | 0.621 | a.22.1 | Histone-fold |
| View | Download | 0.621 | a.22.1 | Histone-fold |
| View | Download | 0.570 | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.552 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.505 | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.485 | a.64.1 | Saposin |
| View | Download | 0.467 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.436 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.435 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.413 | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.390 | a.22.1 | Histone-fold |
| View | Download | 0.372 | d.58.11 | EF-G/eEF-2 domains III and V |
| View | Download | 0.370 | d.45.1 | ClpS-like |
| View | Download | 0.357 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.355 | d.58.36 | Sulfite reductase, domains 1 and 3 |
| View | Download | 0.355 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.347 | d.58.17 | Metal-binding domain |
| View | Download | 0.347 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.343 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.338 | a.5.4 | Elongation factor TFIIS domain 2 |
| View | Download | 0.322 | c.102.1 | Cell-division inhibitor MinC, N-terminal domain |
| View | Download | 0.315 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.306 | a.17.1 | p8-MTCP1 |
| View | Download | 0.303 | d.39.1 | Dynein light chain 8 (DLC8) |
| View | Download | 0.288 | a.4.12 | TrpR-like |
| View | Download | 0.282 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.277 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.274 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.270 | c.13.2 | Anti-sigma factor antagonist SpoIIaa |
| View | Download | 0.260 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.259 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.256 | d.58.49 | YajQ-like |
| View | Download | 0.254 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.254 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.251 | a.4.1 | Homeodomain-like |
| View | Download | 0.248 | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.248 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.247 | d.96.1 | Tetrahydrobiopterin biosynthesis enzymes-like |
| View | Download | 0.246 | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.245 | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.243 | d.58.48 | MTH1187-like |
| View | Download | 0.243 | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.241 | a.64.1 | Saposin |
| View | Download | 0.239 | d.206.1 | YggU-like |
| View | Download | 0.236 | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.232 | d.58.42 | N-utilization substance G protein NusG, N-terminal domain |
| View | Download | 0.231 | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.223 | a.23.4 | Mitochondrial import receptor subunit Tom20 |
| View | Download | 0.223 | a.157.1 | Skp1 dimerisation domain-like |
| View | Download | 0.221 | a.4.1 | Homeodomain-like |
| View | Download | 0.217 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.216 | d.79.5 | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF |
| View | Download | 0.216 | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.207 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.206 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.206 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.206 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.203 | g.63.1 | Mollusk pheromone |
|
Region A: Residues: [207-395] |
1 11 21 31 41 51
| | | | | |
1 DVNQVQKLSK LRVLEILSGH DMIKEQYGVP LLDKDGNSPT LNEFSMWCED QDPCVTGIVM 60
61 EPDDKRDSSH TWYRIPFVCK WRITHRPISI RGTIDDLLNR IGLETADLFE IISPERVYGS 120
121 FKYEYPLQGD SHALHLWFHG EIELDDDSLI VYNGKYHVDV KLQEIDLFRR EKNGQLIQYV 180
181 LYKNEAGDK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
