YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YOL047C
Organism: Saccharomyces cerevisiae
Length: 356 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YOL047C.

Description E-value Query
Range
Subject
Range
RRT8_YEAST - Outer spore wall protein RRT8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RRT8 PE=1 ...
RRT8 - Putative protein of unknown function; identified in a screen for mutants with increased levels of rD...
314.0 [0..43] [319..60]

Back

Predicted Domain #1
Region A:
Residues: [1-182]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTRPQPDWY YHRHPYASTP LAEGEEPQLL PIQDQGNHKK SKIWMAYKAP IVRWYKNAML  60
   61 VKDNFWKDLE SSHQIIWYPY KGISESVGNS DYLHLFFLIF GYYLLNLLLI VAFTSILAWS 120
  121 LLVCIYLPFL GLFALPLAYM QTILISTTLC NSMVKGTDFV LFTRIYGVTF ARKGLTELSE 180
  181 AC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [183-356]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ETISFTPFVY RRSHRLGGLF SKRFYLVSLP QFFIFFFWYI FIAFMFLLLL LVPIVGPITI  60
   61 NMLPFSPGMG FYYFEPYFVD VLHLDSRKLS KVYYKGFAKW LLYSISSGLL ESIPILGGLF 120
  121 IGTNAVGASL WIVKEIKDRD QPAVPPSPPA EPEEPTVGSY APPIQQSIAH INPP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle