Protein: | LAG2 |
Organism: | Saccharomyces cerevisiae |
Length: | 660 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LAG2.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..660] | [1..660] |
Region A: Residues: [1-83] |
1 11 21 31 41 51 | | | | | | 1 MSLHISKLIE QYRSTKDNDL KYMLLRQNFK INDIEDELAP LVNELLLPVL VEEQDMEILN 60 61 LVSFQVLPDL VLSMISDPAA AQL |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.414 | a.4.1 | Homeodomain-like |
View | Download | 0.422 | a.74.1 | Cyclin-like |
View | Download | 0.570 | a.4.2 | Methylated DNA-protein cysteine methyltransferase, C-terminal domain |
View | Download | 0.500 | a.46.1 | Methionine synthase domain |
View | Download | 0.403 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
View | Download | 0.397 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
View | Download | 0.394 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
View | Download | 0.393 | a.4.5 | "Winged helix" DNA-binding domain |
View | Download | 0.362 | a.28.1 | ACP-like |
View | Download | 0.350 | a.4.5 | "Winged helix" DNA-binding domain |
View | Download | 0.331 | a.4.5 | "Winged helix" DNA-binding domain |
View | Download | 0.325 | a.4.5 | "Winged helix" DNA-binding domain |
View | Download | 0.315 | a.3.1 | Cytochrome c |
View | Download | 0.303 | a.4.5 | "Winged helix" DNA-binding domain |
View | Download | 0.291 | a.4.1 | Homeodomain-like |
View | Download | 0.286 | a.130.1 | Chorismate mutase II |
View | Download | 0.285 | a.4.5 | "Winged helix" DNA-binding domain |
View | Download | 0.282 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
View | Download | 0.259 | a.46.1 | Methionine synthase domain |
View | Download | 0.247 | a.4.5 | "Winged helix" DNA-binding domain |
View | Download | 0.246 | a.46.1 | Methionine synthase domain |
View | Download | 0.244 | a.60.9 | lambda integrase-like, N-terminal domain |
View | Download | 0.237 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
View | Download | 0.236 | a.69.2 | Ypt/Rab-GAP domain of gyp1p |
View | Download | 0.234 | a.1.1 | Globin-like |
View | Download | 0.227 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
View | Download | 0.220 | a.4.1 | Homeodomain-like |
View | Download | 0.216 | a.23.5 | Hemolysin expression modulating protein HHA |
View | Download | 0.212 | a.130.1 | Chorismate mutase II |
View | Download | 0.204 | a.4.5 | "Winged helix" DNA-binding domain |
View | Download | 0.201 | a.4.1 | Homeodomain-like |
View | Download | 0.201 | a.4.5 | "Winged helix" DNA-binding domain |
View | Download | 0.201 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
Region A: Residues: [84-209] |
1 11 21 31 41 51 | | | | | | 1 GWVISLICDP LLNQSMIHAN RSFVLIETLR NVLQKIENSP HLDYHQPVNS SLEFISKFIV 60 61 EMKRHMCDVD AAQLSHSLSE SNMLIYIESL NLLLKFSFFS DAASPSVMVT LPFDILNDVF 120 121 TIAQDY |
Region B: Residues: [329-550] |
1 11 21 31 41 51 | | | | | | 1 LSILNDSLTR TQNENDHGSD NLIDSDDGFG SDNDPEQQAY LDELVSEGYD ENMYDGDTDD 60 61 EDADDINVEK NDEATKDITE TNKILLIFSE LHYPQEERFS ELLVELQTKI AINTSLIDKI 120 121 LSKETTELPT HNGEIADLNE ILNEVKGNKP IRKNVIFCTL AHTLSLQSGS ELSVLQLSIE 180 181 VIDHLLVKNH SNNITRGEQF QLIKLILPHL KTNKSFIDTL KA |
Detection Method: | |
Confidence: | 7.67 |
Match: | 1e6vA |
Description: | Alpha chain |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [210-328] |
1 11 21 31 41 51 | | | | | | 1 SATNTNESID RITEKLLLTS TQLTHPVDLE NLCPKMKYNT LAAVSRIWYK FGPIVDKLFT 60 61 NRLLPVLFPP QMGEECNVED VLEIVHNFHP YFSIRRLKDN RPLLSDSTIS QLREGLFGM |
Detection Method: | |
Confidence: | 7.67 |
Match: | 1e6vA |
Description: | Alpha chain |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [551-660] |
1 11 21 31 41 51 | | | | | | 1 GNFTQKIDEG VTLRTMILSL LLQLFPLDYS MLGEILPTIA RYSVRDKDLG VRDLSFQLLD 60 61 QILRTYYNYL IGIDWEWYKD DFYQVLQETC IKKDINTNLL LQFPPYLPHD |
Detection Method: | |
Confidence: | 8.59 |
Match: | 1l9uD |
Description: | DNA-directed RNA polymerase alpha(2), beta, beta-prime and omega subunits |
Matching Structure (courtesy of the PDB): |