| Protein: | RCL1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 367 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RCL1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [10..366] | [9..372] |
|
|
0.0 | [1..367] | [1..367] |
|
|
0.0 | [10..366] | [9..372] |
|
|
0.0 | [11..366] | [9..362] |
|
|
0.0 | [11..366] | [8..378] |
|
Region A: Residues: [1-81] |
1 11 21 31 41 51
| | | | | |
1 MSSSAPKYTT FQGSQNFRLR IVLATLSGKP IKIEKIRSGD LNPGLKDYEV SFLRLIESVT 60
61 NGSVIEISYT GTTVIYRPGI I
|
| Detection Method: |  |
| Confidence: | 149.24799 |
| Match: | 1qmhA_ |
| Description: | RNA 3'-terminal phosphate cyclase, RPTC, insert domain; RNA 3'-terminal phosphate cyclase, RPTC |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 2.54689525592227 | bayes_pls_golite062009 |
| transferase activity | 1.7007536630883 | bayes_pls_golite062009 |
| transferase activity, transferring alkyl or aryl (other than methyl) groups | 1.24131488513793 | bayes_pls_golite062009 |
|
Region A: Residues: [82-177] |
1 11 21 31 41 51
| | | | | |
1 VGGASTHICP SSKPVGYFVE PMLYLAPFSK KKFSILFKGI TASHNDAGIE AIKWGLMPVM 60
61 EKFGVRECAL HTLKRGSPPL GGGEVHLVVD SLIAQP
|
| Detection Method: | |
| Confidence: | 149.24799 |
| Match: | 1qmhA_ |
| Description: | RNA 3'-terminal phosphate cyclase, RPTC, insert domain; RNA 3'-terminal phosphate cyclase, RPTC |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [178-367] |
1 11 21 31 41 51
| | | | | |
1 ITMHEIDRPI ISSITGVAYS TRVSPSLVNR MIDGAKKVLK NLQCEVNITA DVWRGENSGK 60
61 SPGWGITLVA QSKQKGWSYF AEDIGDAGSI PEELGEKVAC QLLEEISKSA AVGRNQLPLA 120
121 IVYMVIGKED IGRLRINKEQ IDERFIILLR DIKKIFNTEV FLKPVDEADN EDMIATIKGI 180
181 GFTNTSKKIA
|
| Detection Method: | |
| Confidence: | 149.24799 |
| Match: | 1qmhA_ |
| Description: | RNA 3'-terminal phosphate cyclase, RPTC, insert domain; RNA 3'-terminal phosphate cyclase, RPTC |
| Matching Structure (courtesy of the PDB): |
|
