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View Structure Prediction Details

Protein: BSC5
Organism: Saccharomyces cerevisiae
Length: 489 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BSC5.

Description E-value Query
Range
Subject
Range
BSC5 - Protein of unknown function, ORF exhibits genomic organization compatible with a translational readt...
BSC5_YEAST - Bypass of stop codon protein 5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BSC5 PE=1...
0.0 [1..489] [1..489]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
0.0 [67..464] [127..543]

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Predicted Domain #1
Region A:
Residues: [1-489]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQESKEPQNK FEGCQRISSS SSTLFGGTSF EEPRCGTSQG KEEDAFACNN GDHCSSITNV  60
   61 QEDDFVLPEL LPSFEMYENL LSNIPQSSFD TYFPENPPFY EVASRNQSIP SEGESGNDMR 120
  121 ILTGDIVGPD NHEVTVDGRR FASGPAESQI RNYDDTKGIP VENIYALPRI KTPIATELYV 180
  181 TKTAPKFGQL PKHESMLREY TSGDIIHGYF TVENKSTKPI KFDMFYLTLE GTTSSKTQSP 240
  241 FGIQKTTERI LRMVDMAASW SYNHEDVNTG EDLCGFFDSI DKTSFGLPNS RILNPGDKRK 300
  301 KFFTFKIPNQ LLDVTCKHGH FSHSLLPPTL GFDRPSSSHP ELSTLKFSES LGYGRLSERG 360
  361 SSLWLNDSSS GSLINYSINA MIVGKDVASG RVCLMSEKKY SIRIVPFGFQ NNPISREKCL 420
  421 KDLEDFDIEI ANRLGMIEKV FSKIERAIPI HKEDIQEANR SDQLSPLRGK YEWNAVAGNT 480
  481 ENGTLKKKH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [179-409]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YVTKTAPKFG QLPKHESMLR EYTSGDIIHG YFTVENKSTK PIKFDMFYLT LEGTTSSKTQ  60
   61 SPFGIQKTTE RILRMVDMAA SWSYNHEDVN TGEDLCGFFD SIDKTSFGLP NSRILNPGDK 120
  121 RKKFFTFKIP NQLLDVTCKH GHFSHSLLPP TLGFDRPSSS HPELSTLKFS ESLGYGRLSE 180
  181 RGSSLWLNDS SSGSLINYSI NAMIVGKDVA SGRVCLMSEK KYSIRIVPFG F

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.34
Match: 2fauA
Description: No description for 2fauA was found.

Predicted Domain #3
Region A:
Residues: [410-489]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QNNPISREKC LKDLEDFDIE IANRLGMIEK VFSKIERAIP IHKEDIQEAN RSDQLSPLRG  60
   61 KYEWNAVAGN TENGTLKKKH 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle