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View Structure Prediction Details

Protein: YNR068C
Organism: Saccharomyces cerevisiae
Length: 272 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YNR068C.

Description E-value Query
Range
Subject
Range
gi|773190 - gi|773190|dbj|BAA08787.1| BUL1 [Saccharomyces cerevisiae]
0.0 [2..268] [687..972]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
0.0 [2..268] [687..972]

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Predicted Domain #1
Region A:
Residues: [1-120]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNRQNQKNW TNLRGLLSVE EREKLENLRL ELVCMQAANS IPHDPPEISS LETELICLTT  60
   61 NTKDCKPVRF HSDLLLKKHK YNEIKKIFKE ILENIEAYRD EFTKNQTKIN LLLADDARAS 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [121-272]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LRNRSLDFSD LMPSSIIKDV QVLANMEANV VVMKNALKTK LVGEKSVPVA SSPISSIIPR  60
   61 TSRNKKTSPS NYHHSVLSHR KSNEWNQVSS TEYKRTLLLN IKYNDDFKAT IVPSFESCLC 120
  121 SRSYFLRVKL HFDKGVGSAE IDIPVQVKNS FI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle