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View Structure Prediction Details

Protein: YNR061C
Organism: Saccharomyces cerevisiae
Length: 219 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YNR061C.

Description E-value Query
Range
Subject
Range
gi|207341524 - gi|207341524|gb|EDZ69555.1| YNR061Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|151944589 - gi|151944589|gb|EDN62867.1| conserved protein [Saccharomyces cerevisiae YJM789]
YNR061C - Putative protein of unknown function
YN8Z_YEAST - Uncharacterized vacuolar membrane protein YNR061C OS=Saccharomyces cerevisiae (strain ATCC 204508 / ...
5.0E-98 [1..219] [1..219]

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Predicted Domain #1
Region A:
Residues: [1-145]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKLTTTSVT FHVLRYFQLG LSVTNLLLAS FAIITNYKVD RILRLSLAVS IISSVYFGIV  60
   61 RFLPVLLIFV MEIVQTVLWF TAFVTLASKF GSMSCSSMPR GINFDYSGSC KIAKIDILPE 120
  121 AVLFILFLAT TYASYITVLS QAKEN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.844 N/A N/A a.47.2 t-snare proteins

Predicted Domain #2
Region A:
Residues: [146-219]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSSTRSVLKA CVKALRDTVD RLETSLEESE PLLDLEVQED ARTETESIED STDSEDNANI  60
   61 EQEKVIDGSI EHSS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle