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View Structure Prediction Details

Protein: ATP23
Organism: Saccharomyces cerevisiae
Length: 270 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATP23.

Description E-value Query
Range
Subject
Range
ATP23 - Putative metalloprotease of the mitochondrial inner membrane, required for processing of Atp6p; has ...
0.0 [1..270] [1..270]
SPCC320.12 - mitochondrial inner membrane peptidase Atp23
ATP23_SCHPO - Mitochondrial inner membrane protease atp23 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) G...
3.0E-71 [87..269] [10..185]
gi|4867999 - gi|4867999|gb|AAD31085.1|AF078164_1 Ku70-binding protein [Homo sapiens]
2.0E-66 [91..268] [93..264]
gi|18396541, gi|... - gi|6017109|gb|AAF01592.1|AC009895_13 hypothetical protein [Arabidopsis thaliana], gi|18396541|ref|NP...
4.0E-58 [103..267] [36..192]
ATP23_MOUSE - Mitochondrial inner membrane protease ATP23 homolog OS=Mus musculus GN=Xrcc6bp1 PE=1 SV=1
4.0E-51 [100..236] [60..194]

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Predicted Domain #1
Region A:
Residues: [1-66]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTMRTNKKNK SSNIKMIRRV RHNLYNQNQG KLIVPNFFFF WHDMNSSGDN AGFEWWRRTM  60
   61 QYKTGI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [67-270]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLTPEEKTRY EDDSKARELK KECLKCYEYR DWMLKYSPTV RFMVQAITKL NKGSDSKFDD  60
   61 SKIICDYCPD WKGGGFHPEL GILLCQNRLR DKWHLEDTLS HELIHYFDDL KWQIDWLNLK 120
  121 HHACSEIRAS SLSGECRFWE EFKRRGFRTG FHVARGHQDC VRRRAIISVS GNPNCQSKEH 180
  181 AAKIVDEVWD SCFADTRPFD EIYR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle