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View Structure Prediction Details

Protein: EGT2
Organism: Saccharomyces cerevisiae
Length: 1041 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EGT2.

Description E-value Query
Range
Subject
Range
SPBPJ4664.02 - glycoprotein
YHU2_SCHPO - Uncharacterized threonine-rich GPI-anchored glycoprotein PJ4664.02 OS=Schizosaccharomyces pombe (str...
4.0E-94 [5..1034] [1328..2370]
gi|3649741 - gi|3649741|emb|CAA03985.1| mucin [Homo sapiens]
1.0E-71 [27..1026] [29..1040]

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Predicted Domain #1
Region A:
Residues: [1-412]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKLLLHLVR VISILGLANA LTQTQPILKD IQITDSYTKT KECTDPDHWF IIEGQLSIPK  60
   61 GSQQNITFQV PDAFSSFPQE PFSIKHNSNS VATISRPDKS TNNFTISIPE KSSEDITTTF 120
  121 NFLAQLTSDA KSKVTEPKSI VYSFYSENTM FNDVIDYVAK NTSAITTDGG IYKTNNTAWF 180
  181 TVDLPMRTFR NPVYLTSQTS SSSDYVFDTS LTKFEVVTAV DSFNEPINAI PYTTVHDYST 240
  241 EDEIRCLFNS TISGGLYFRV TYFTKKLSTS SISNTVELTY PDEGTSVRLL GKRDTSTTLA 300
  301 SELYSESAAN IDSTTSDDTT SSDAAITPTY SNSTLSSYTS QSSAIPEVAV TASLSSGILS 360
  361 STVDGASTSA DASMSAVSTV SSSSEQASSS SISLSAPSSS NSTFTTPSSS LS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [413-1041]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ATETYSIISS ASISVTQASY IDNSTTTAVT QSTSTIAVSS AEKLSSTLSY TSNVTISVSS  60
   61 ATQHTTTPSY VSNSTTLSSS SVLESVISSP YLANTTVSGA SSASQSTNPP YVSNSTTSSA 120
  121 TQLATIAPFA INITGTSISS SITNTSSVSS TTSSLSSGPF VSNTAVASGS YILTTTTESA 180
  181 QLTEIGSLIP ISTITTSTTT SGTDKTGSNK VASSTEIAQS IVNNSSLSVS TINTNAATAA 240
  241 ANARNATFTH ATHSGSLQPS YHSSSLLSST IDTKVTTATT STSRDGSSSL AFTTGLNQSV 300
  301 VTGTDKSDTY SVISSTESAQ VTEYDSLLPI STLKPTVVTG TSRNSTFSMV SSTKLTEATA 360
  361 TDKGDAYSVI SSTQSAQVTE YGSMLPISTL ETPTVIMSTD ESGYFTLTTC TESGQATEYG 420
  421 SLIPISTLDG SVIYTFTGES VVVGYSTTVG AAQYAQHTSL VPVSTIKGSK TSLSTEESVV 480
  481 AGYSTTVGAA QYAQHTSLVP VSTIKGSKTS LSTEESVVAG YSTTVDSAQY AEHTNLVAID 540
  541 TLKTSTFQKA TATEVCVTCT ALSSPHSATL DAGTTISLPT SSSTSLSTII TWYSSSTIKP 600
  601 PSISTYSGAA GQLTIRIGSL LLGLISFLL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [328-649]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTYSNSTLSS YTSQSSAIPE VAVTASLSSG ILSSTVDGAS TSADASMSAV STVSSSSEQA  60
   61 SSSSISLSAP SSSNSTFTTP SSSLSATETY SIISSASISV TQASYIDNST TTAVTQSTST 120
  121 IAVSSAEKLS STLSYTSNVT ISVSSATQHT TTPSYVSNST TLSSSSVLES VISSPYLANT 180
  181 TVSGASSASQ STNPPYVSNS TTSSATQLAT IAPFAINITG TSISSSITNT SSVSSTTSSL 240
  241 SSGPFVSNTA VASGSYILTT TTESAQLTEI GSLIPISTIT TSTTTSGTDK TGSNKVASST 300
  301 EIAQSIVNNS SLSVSTINTN AA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.154902
Match: 2h6oA
Description: No description for 2h6oA was found.

Predicted Domain #4
Region A:
Residues: [650-730]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TAAANARNAT FTHATHSGSL QPSYHSSSLL SSTIDTKVTT ATTSTSRDGS SSLAFTTGLN  60
   61 QSVVTGTDKS DTYSVISSTE S

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [731-834]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AQVTEYDSLL PISTLKPTVV TGTSRNSTFS MVSSTKLTEA TATDKGDAYS VISSTQSAQV  60
   61 TEYGSMLPIS TLETPTVIMS TDESGYFTLT TCTESGQATE YGSL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [835-916]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPISTLDGSV IYTFTGESVV VGYSTTVGAA QYAQHTSLVP VSTIKGSKTS LSTEESVVAG  60
   61 YSTTVGAAQY AQHTSLVPVS TI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [917-1041]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KGSKTSLSTE ESVVAGYSTT VDSAQYAEHT NLVAIDTLKT STFQKATATE VCVTCTALSS  60
   61 PHSATLDAGT TISLPTSSST SLSTIITWYS SSTIKPPSIS TYSGAAGQLT IRIGSLLLGL 120
  121 ISFLL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle