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View Structure Prediction Details

Protein: RPS19B
Organism: Saccharomyces cerevisiae
Length: 144 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPS19B.

Description E-value Query
Range
Subject
Range
gi|73948285 - gi|73948285|ref|XP_533657.2| PREDICTED: similar to ribosomal protein S19 [Canis familiaris]
258.0 [0..1] [144..142]
gi|114677415 - gi|114677415|ref|XP_512692.2| PREDICTED: similar to ribosomal protein S19 [Pan troglodytes]
253.0 [0..2] [144..88]
gi|60653357 - gi|60653357|gb|AAX29373.1| ribosomal protein S19 [synthetic construct]
251.0 [0..1] [144..1]
gi|109124930, gi... - gi|109124930|ref|XP_001103598.1| PREDICTED: similar to ribosomal protein S19 isoform 1 [Macaca mulat...
RS19_PONAB - 40S ribosomal protein S19 OS=Pongo abelii GN=RPS19 PE=2 SV=3
RPS19 - ribosomal protein S19
CCDS12588.1_1 - null
gi|149722178 - gi|149722178|ref|XP_001501616.1| PREDICTED: similar to ribosomal protein S19 [Equus caballus]
gi|149410258 - gi|149410258|ref|XP_001509109.1| PREDICTED: similar to S19 ribosomal protein [Ornithorhynchus anatin...
gi|164507151 - gi|164507151|gb|ABY59788.1| ribosomal protein S19 [Ailuropoda melanoleuca]
ENSPTRT00000020505 - null
gi|157928282, gi... - gi|60656401|gb|AAX32764.1| ribosomal protein S19 [synthetic construct], gi|157928282|gb|ABW03437.1| ...
gi|90076586, gi|... - gi|90076586|dbj|BAE87973.1| unnamed protein product [Macaca fascicularis], gi|90075572|dbj|BAE87466....
RS19_BOVIN - 40S ribosomal protein S19 OS=Bos taurus GN=RPS19 PE=2 SV=3
gi|126344107 - gi|126344107|ref|XP_001363730.1| PREDICTED: similar to novel lectin C-type domain containing protein...
RS19_PONPY - 40S ribosomal protein S19 - Pongo pygmaeus (Orangutan)
250.0 [0..1] [144..1]
RS19_MOUSE - 40S ribosomal protein S19 OS=Mus musculus GN=Rps19 PE=1 SV=3
RS19_RAT - 40S ribosomal protein S19 OS=Rattus norvegicus GN=Rps19 PE=2 SV=3
gi|57716 - gi|57716|emb|CAA36003.1| unnamed protein product [Rattus rattus]
250.0 [0..1] [144..1]
gi|37748501, gi|... - gi|41152179|ref|NP_957044.1| ribosomal protein S19 [Danio rerio], gi|37748501|gb|AAH59557.1| Ribosom...
247.0 [0..1] [141..1]
RS19_ICTPU - 40S ribosomal protein S19 OS=Ictalurus punctatus GN=rps19 PE=2 SV=1
246.0 [0..1] [141..1]
gi|34194029, gi|... - gi|34194029|gb|AAH56505.1| Rps19-prov protein [Xenopus laevis], gi|148223451|ref|NP_001080796.1| rib...
246.0 [0..1] [141..1]

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Predicted Domain #1
Region A:
Residues: [1-144]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGVSVRDVA AQDFINAYAS FLQRQGKLEV PGYVDIVKTS SGNEMPPQDA EGWFYKRAAS  60
   61 VARHIYMRKQ VGVGKLNKLY GGAKSRGVRP YKHIDASGSI NRKVLQALEK IGIVEISPKG 120
  121 GRRISENGQR DLDRIAAQTL EEDE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 54.045757
Match: 2v7fA
Description: No description for 2v7fA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle