Protein: | PSY2 |
Organism: | Saccharomyces cerevisiae |
Length: | 858 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PSY2.
Description | E-value | Query Range |
Subject Range |
|
851.0 | [0..23] | [714..231] |
|
831.0 | [0..23] | [714..100] |
|
819.0 | [0..24] | [714..172] |
|
816.0 | [0..21] | [714..26] |
|
804.0 | [0..24] | [714..1] |
|
804.0 | [0..24] | [714..1] |
|
803.0 | [0..24] | [714..1] |
Region A: Residues: [1-162] |
1 11 21 31 41 51 | | | | | | 1 MSLPGTPTTS PTPMDEDTEQ AVSVNTEPKR VKVYILENNE WKDTGTGFCI GEVDEGKFAY 60 61 LVVSDEDSPT ETLLKSKLEG NIEYQRQEET LIVWKDLGGK DIALSFEESM GCDTLCEFIV 120 121 HVQRNIESNI SLVTVKSSDN GLGSVHDIIT GPVTLPSNDQ QQ |
Region A: Residues: [163-241] |
1 11 21 31 41 51 | | | | | | 1 NSQTLLEALK ILNENTSFDF LKNETIEFIL QSNYIDTLIS HFHKAEEEKI PKDLFLLSNI 60 61 IKTLILYNKR DILESMVED |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.869 | a.50.1 | Anaphylotoxins (complement system) |
View | Download | 0.855 | a.118.9 | ENTH/VHS domain |
View | Download | 0.846 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
View | Download | 0.836 | a.118.9 | ENTH/VHS domain |
View | Download | 0.836 | a.118.9 | ENTH/VHS domain |
View | Download | 0.801 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
View | Download | 0.780 | a.118.9 | ENTH/VHS domain |
View | Download | 0.705 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
Region A: Residues: [242-534] |
1 11 21 31 41 51 | | | | | | 1 DRIMGIVGIL EYDTEYPTSK ANHRKYLGSK GPNFKEVIPL ENEDLKIIMK KCFRLQFLKD 60 61 VVLVRFLDDH NFNLISEIVM DLETCIIDFL QVGTFLDRLI ELYDTKTLPE SSSEKEKFVQ 120 121 KRKDGIRLLQ QCVQMSINLD AVDRSKFYKT LVRKGLFKVL DYAFHMETDS NVRILATDTI 180 181 ITIIEHDILL IHNVQNEDSF KRQHKSAPDD KSSHRKYPQD YSSSTDSKLL LILSTILLSD 240 241 RSPGLREQVV QALNTLLHPE GCVGNGEGSY DLMGRSNYEA KNTSEDFPSF SYG |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [535-599] |
1 11 21 31 41 51 | | | | | | 1 LNSDSINLNN YHYSSDEMNN LEPESESEFQ VMEYFANFYN KIAPILFGPL IKKDITTEMA 60 61 EIDGQ |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.633 | a.64.1 | Saposin |
View | Download | 0.624 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
View | Download | 0.430 | b.36.1 | PDZ domain-like |
View | Download | 0.388 | d.87.1 | FAD/NAD-linked reductases, dimerisation (C-terminal) domain |
Region A: Residues: [600-718] |
1 11 21 31 41 51 | | | | | | 1 IEKVTKDDLL LIHLVKLVSF VCTEHDRVLS RRFILENGIL DSVSKLIGGN HMMQLRLTAV 60 61 RCIKNLMCLD DKYYHRYMIS KNLYAPVFKL FQENIDKNNL ANSCIQDFFR IIITECRAY |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.972 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
View | Download | 0.898 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
View | Download | 0.842 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
View | Download | 0.842 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
View | Download | 0.839 | N/A | N/A | a.118.9 | ENTH/VHS domain |
View | Download | 0.830 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
View | Download | 0.829 | N/A | N/A | a.1.1 | Globin-like |
View | Download | 0.766 | N/A | N/A | a.1.1 | Globin-like |
View | Download | 0.722 | N/A | N/A | a.25.2 | Thermoplasma ferritin-like 4-helical bundle |
View | Download | 0.703 | N/A | N/A | a.1.1 | Globin-like |
Region A: Residues: [719-858] |
1 11 21 31 41 51 | | | | | | 1 QSDGHNRKEK TNGSYDGNGN DVKTNVNNNR TNFTILNKYL VQTYGDVLRK ATDIPFIQDM 60 61 LETGEENQPD HSSFENSIEG GNDISVNMST DGFASNHLED IDIKNVKRLH SEIEHFENDP 120 121 HYSGDQLAFK KSVDQMNAST |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.