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View Structure Prediction Details

Protein: YNL193W
Organism: Saccharomyces cerevisiae
Length: 558 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YNL193W.

Description E-value Query
Range
Subject
Range
YNL193W - Putative protein of unknown function; exhibits a two-hybrid interaction with Yhr151cp in a large-sca...
0.0 [1..558] [1..558]
SPAC926.02 - conserved fungal protein
YFT2_SCHPO - UPF0656 protein C926.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC926.02 PE=3 SV...
0.002 [17..109] [16..105]

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Predicted Domain #1
Region A:
Residues: [1-558]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGPPKNFKHF SKSNKHKKEQ KALITQEDFY LAAIDCEEQA DRWLLSDIKK CLRFYLKALE  60
   61 HYENGLTALD STQEGKYNIY YNETRLFLQI YTDYLANNGY INILQYVKMD DMPDLSNLVL 120
  121 SVPQIIQRFE IVYETFPEQR TWDLQFNLLT CYLTLIESLD DTVSPTVAME GADILTLTNK 180
  181 YIEIFQHLVN YLLQELQNWS ENAEQDSDDT DTELQRDTLD EDAMQVTRDG SGIRTNGPVQ 240
  241 PPAEVMDVSE QVTPSSLTEV LANSLKFNHA LMELVIESKI SIEKNVETKI LNPIQINFLE 300
  301 DTTNKFYLQL RDIIDSISAA IPLDLKEIGL AKTLIEGLNI ISSGTFESLQ DFVLQTVSFT 360
  361 DLLDEKDVQG KIDLSLIRVD IVEFAILCLN DYSSDASWKL SGLLTKVLTE ARTLLTDYRN 420
  421 QILFLKNQTL NEQLSHVVFQ LCDVLVNSSD NELRRYAIKE STEKSQKTPG GAHTLNILMK 480
  481 NANVFLNNAV AISSKQCGLQ ETIIDKLKRN YIHNQAKERL LFLQRLEQKS NEDDGTSASP 540
  541 TAMTFDMPPE HPFYSHYR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle