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View Structure Prediction Details

Protein: RPC31
Organism: Saccharomyces cerevisiae
Length: 251 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPC31.

Description E-value Query
Range
Subject
Range
gi|170984 - gi|170984|gb|AAA34390.1| acidic protein 2
0.0 [1..251] [1..251]

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Predicted Domain #1
Region A:
Residues: [1-251]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSYRGGSRG GGSNYMSNLP FGLGYGDVGK NHITEFPSIP LPINGPITNK ERSLAVKYIN  60
   61 FGKTVKDGPF YTGSMSLIID QQENSKSGKR KPNIILDEDD TNDGIERYSD KYLKKRKIGI 120
  121 SIDDHPYNLN LFPNELYNVM GINKKKLLAI SKFNNADDVF TGTGLQDENI GLSMLAKLKE 180
  181 LAEDVDDAST GDGAAKGSKT GEGEDDDLAD DDFEEDEDEE DDDDYNAEKY FNNGDDDDYG 240
  241 DEEDPNEEAA F

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle