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View Structure Prediction Details

Protein: YNL146W
Organism: Saccharomyces cerevisiae
Length: 100 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YNL146W.

Description E-value Query
Range
Subject
Range
gi|1730784, gi|8... - gi|854492|emb|CAA86880.1| orf3 [Saccharomyces cerevisiae], gi|1730784|sp|P53906|YNO6_YEAST Hypotheti...
82.0 [0..1] [100..1]

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Predicted Domain #1
Region A:
Residues: [1-100]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNTKHTTSH HMELKRIIIL TLLFILIMLI FRNSVSFKMT FQELLPRFYK KNSNSVSNNN  60
   61 RPSSIFSENL VDFDDVNMVD KTRLFIFLFF SFIITIPFMV 

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Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.751 a.7.15 Description not found.
View Download 0.688 a.24.17 Group V grass pollen allergen
View Download 0.688 a.24.17 Group V grass pollen allergen
View Download 0.592 a.24.10 Histidine-containing phosphotransfer domain, HPT domain
View Download 0.564 a.118.9 ENTH/VHS domain
View Download 0.564 a.118.9 ENTH/VHS domain
View Download 0.530 a.7.12 Description not found.
View Download 0.523 a.61.1 Retroviral matrix proteins
View Download 0.521 a.4.5 "Winged helix" DNA-binding domain
View Download 0.501 a.130.1 Chorismate mutase II
View Download 0.488 a.100.1 6-phosphogluconate dehydrogenase C-terminal domain-like
View Download 0.373 a.7.8 GAT domain
View Download 0.237 a.100.1 6-phosphogluconate dehydrogenase C-terminal domain-like
View Download 0.222 a.23.1 HSC20 (HSCB), C-terminal oligomerisation domain
View Download 0.220 a.240.1 Description not found.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle