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View Structure Prediction Details

Protein: YNL143C
Organism: Saccharomyces cerevisiae
Length: 130 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YNL143C.

Predicted Domain #1
Region A:
Residues: [1-130]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREQLKLFTR EIVDFTFLIL SGFDYYQTLL ISSNSSKKRP KDSSLLSEKK KKKKKKKKDV  60
   61 LSYLSYLKDL PFVPFLFWQP GYSQREKNPR QHSLFIMTIT KPGMISMADM NYVVSKNRSL 120
  121 NRPAERGGNR 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.638 f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.638 f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.519 f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.519 f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.491 a.7.3 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
View Download 0.491 a.7.3 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
View Download 0.453 a.121.1 Tetracyclin repressor-like, C-terminal domain
View Download 0.450 a.24.26 Description not found.
View Download 0.417 a.7.1 Spectrin repeat
View Download 0.414 a.45.1 Glutathione S-transferase (GST), C-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle