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View Structure Prediction Details

Protein: FYV6
Organism: Saccharomyces cerevisiae
Length: 173 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FYV6.

Description E-value Query
Range
Subject
Range
FYV6_CANGA - Protein FYV6 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=...
FYV6_CANGA - Protein FYV6 OS=Candida glabrata GN=FYV6 PE=3 SV=1
54.0 [0..14] [123..3]
FYV6_KLULA - Protein FYV6 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1...
FYV6_KLULA - Protein FYV6 OS=Kluyveromyces lactis GN=FYV6 PE=3 SV=1
53.0 [0..12] [155..2]

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Predicted Domain #1
Region A:
Residues: [1-173]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTSDNNAN SAREKKPLKF VSEGVGNVEA QRIREQVEQK KYEAEYKRKT RKSLRDQLRS  60
   61 NAISKQKQYN GLVRDRESFT RLSKEDLEFY QKSKNELLKK EKELNNYLDV KAINFEKKKK 120
  121 ALLMENDSTT NTEKYLETGT SLGSKTQIKG VKTSSPKPKI KVSIKKLGRK LEN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.1
Match: 1rh1A
Description: crystal structure of the cytotoxic bacterial protein colicin B at 2.5 A resolution
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle