| Protein: | MET4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 672 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MET4.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..672] | [1..672] |
|
Region A: Residues: [1-174] |
1 11 21 31 41 51
| | | | | |
1 MKQEQSHEGD SYSTEFINLF GKDTATHPSS NNGANNNGMG STNSLDQFVA TASSSSSLVT 60
61 SSENRRPLIG DVTNRGNTNL YDHAVTPEIL LEQLAYVDNF IPSLDNEFSN VDWNVNTTHN 120
121 NANNNGADTF SSINANPFDL DEQLAIELSA FADDSFIFPD EDKPSNNNNN SNNG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [175-551] |
1 11 21 31 41 51
| | | | | |
1 NDDHSNHDVL HEDPSTNNRQ RNPHFLTQRR NTFLTSQYDQ SKSRFSSKNK RNGNNGETNN 60
61 FGDNMQNNHP FEPNFMGSPS QFPADATNMT SIDHGGFTNV DITSTENNTT GDNGVDALSN 120
121 LLHRTTHTPN RSSPLSNVTS AQNSSSQQRK HSESKVDSNS DNNSSNKAPN ITVPDYSIIP 180
181 TSVLVTLLPR VNVPNGAYNS LISAGFDNDQ IDAIAAIMAY HHQKKIRENN SNNNKNINTN 240
241 DSQEAPILKN INELLSVLIP PSPAETRGPT TLSTSPSFNE HGVVAEASFL SSILELGIKH 300
301 PKSNNIHNQR QPSRNDHKIS RESDGNNGND NVHHNNAVIK SSTTRGDEIA KIRSEPTLNA 360
361 SSSDHKENSL KRSHSGD
|
| Detection Method: | |
| Confidence: | 11.42 |
| Match: | 1k83A |
| Description: | RBP1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [552-672] |
1 11 21 31 41 51
| | | | | |
1 LKNKKVPVDR KYSDNEDDEY DDADLHGFEK KQLIKKELGD DDEDLLIQSK KSHQKKKLKE 60
61 KELESSIHEL TEIAASLQKR IHTLETENKL LKNLVLSSGE TEGIKKAESL KKQIFEKVQK 120
121 E
|
| Detection Method: | |
| Confidence: | 8.01 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
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