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View Structure Prediction Details

Protein: RPS7B
Organism: Saccharomyces cerevisiae
Length: 190 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPS7B.

Description E-value Query
Range		 Subject
Range
gi|55594424 - gi|55594424|ref|XP_515279.1| PREDICTED: similar to 40S ribosomal protein S7 (S8) [Pan troglodytes]
RPS7 - ribosomal protein S7
RS7_BOVIN - 40S ribosomal protein S7 OS=Bos taurus GN=RPS7 PE=2 SV=1
RS7_RAT - 40S ribosomal protein S7 OS=Rattus norvegicus GN=Rps7 PE=1 SV=1
gi|126303250 - gi|126303250|ref|XP_001372205.1| PREDICTED: similar to ribosomal protein S7 [Monodelphis domestica]
ENSOCUP000000073... - pep:novel scaffold:oryCun2:GL018721:247664:252773:1 gene:ENSOCUG00000008507 transcript:ENSOCUT000000...
RS7_FELCA - 40S ribosomal protein S7 OS=Felis catus GN=RPS7 PE=2 SV=1
ENSCJAT000000435... - null, null, null
RS7_MOUSE - 40S ribosomal protein S7 OS=Mus musculus GN=Rps7 PE=2 SV=1
gi|57098089 - gi|57098089|ref|XP_532859.1| PREDICTED: similar to 40S ribosomal protein S7 (S8) isoform 1 [Canis fa...
gi|60655919, gi|... - gi|60655919|gb|AAX32523.1| ribosomal protein S7 [synthetic construct], gi|208967334|dbj|BAG73681.1| ...
ENSMMUT000000166... - null, null
gi|149727784 - gi|149727784|ref|XP_001503681.1| PREDICTED: similar to ribosomal protein S7 [Equus caballus]
gi|297172 - gi|297172|emb|CAA37457.1| ribosomal protein S7 [Rattus rattus]
 1.0E-88 [1..186] [1..190]
RS7_XENLA - 40S ribosomal protein S7 OS=Xenopus laevis GN=rps7 PE=2 SV=2
 5.0E-87 [1..186] [1..190]
RS7_ICTPU - 40S ribosomal protein S7 OS=Ictalurus punctatus GN=rps7 PE=2 SV=1
 1.0E-86 [1..186] [1..190]
RS7_TAKRU - 40S ribosomal protein S7 OS=Takifugu rubripes GN=rps7 PE=3 SV=1
 6.0E-86 [1..186] [1..190]
RS7_BRAOL - 40S ribosomal protein S7 OS=Brassica oleracea GN=RPS7 PE=2 SV=1
 8.0E-77 [1..188] [1..189]
RS73_ARATH - 40S ribosomal protein S7-3 OS=Arabidopsis thaliana GN=RPS7C PE=1 SV=2
 3.0E-76 [1..188] [1..189]
rps7 - 40S ribosomal protein S7
RS7_SCHPO - 40S ribosomal protein S7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rps7 PE=1 SV=2
 5.0E-76 [3..189] [2..191]

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Predicted Domain #1
Region A:
Residues: [1-190] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSVQSKILS QAPSELELQV AKTFIDLESS SPELKADLRP LQIKSIREID VTGGKKALVL  60
   61 FVPVPALSAY HKVQTKLTRE LEKKFPDRHV IFLAERRILP KPSRTSRQVQ KRPRSRTLTA 120
  121 VHDKVLEDMV FPTEIVGKRV RYLVGGNKIQ KVLLDSKDVQ QIDYKLESFQ AVYNKLTGKQ 180
  181 IVFEIPSQTN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 124.657577
Match: PF01251
Description: Ribosomal protein S7e

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle