Protein: | TCB2 |
Organism: | Saccharomyces cerevisiae |
Length: | 1178 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TCB2.
Description | E-value | Query Range |
Subject Range |
|
848.0 | [0..1] | [1178..1] |
|
706.0 | [0..12] | [1138..16] |
|
704.0 | [0..42] | [1165..105] |
|
662.0 | [0..5] | [1139..42] |
|
642.0 | [0..1] | [1138..11] |
|
639.0 | [0..11] | [1173..74] |
|
622.0 | [0..59] | [1115..130] |
|
610.0 | [0..84] | [1110..158] |
|
609.0 | [0..3] | [1110..73] |
Region A: Residues: [1-206] |
1 11 21 31 41 51 | | | | | | 1 MSPNSSKTRT DQISSMPGIN EATKVESKNV VKDAVPIKSE VETNGTSIVR EKQDPSYVGW 60 61 KQVGGWEEKD ELTSEDLLVD VNKDTFLGNL LPDKFYGDWY HEVAILIIAG LCSFVLGYFK 120 121 FSLASVLIVM LTTGMLYRTS SKKYRESLRD LAQKEQTVEK ITSDYESVEW LNTFLDKYWP 180 181 IIEPSVSQQI VDGTNTALSE NVAIPK |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [207-362] |
1 11 21 31 41 51 | | | | | | 1 FIKAIWLDQF TLGVKPPRID AIKTFQNTKS DVVVMDVCLS FTPHDMSDLD AKQCRNYVNS 60 61 NVVLKAKIFG MDIPVSVADI FFQVFVRFRF QLMTTLPLVE TINIQLLEVP EVDFISRLLG 120 121 NSVFNWEILA IPGLMRLIQK MAFKYLSPVL LPPFSL |
Detection Method: | |
Confidence: | 123.124002 |
Match: | 1dqvA |
Description: | Synaptogamin I |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [363-488] |
1 11 21 31 41 51 | | | | | | 1 QLNIPQLLSK TGLPIGVLEI KVKNAHGLRK LVGMIKKTVD PYLTFELSGK IVGKTKVFKN 60 61 SANPVWNESI YILLQSFTDP LTIAVYDKRE TLSDKKMGTV IFNLNKLHAN HYHKNEKVHF 120 121 LRNSKP |
Detection Method: | |
Confidence: | 123.124002 |
Match: | 1dqvA |
Description: | Synaptogamin I |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [489-622] |
1 11 21 31 41 51 | | | | | | 1 VGELTFDLRF FPTIEPKKLL NGDEEPLPDM NTGITKITIR ELKGLDELSD KKFVFAELYV 60 61 NAELVMTTKK EKRTAHLKWN SDYYSVVTDR RKTICRFVLK DQSGKVISSS VQPLNHLIDR 120 121 TEVNKEWIPL RNGK |
Region A: Residues: [623-781] |
1 11 21 31 41 51 | | | | | | 1 GELKVTTYWR PVDIDLGLKS VGYTTPIGML RVFINKAENL RNPDSLGKIS PYAKVSVNGV 60 61 ARGRTNERIE TLNPIWNQSI YVSVTSPLQK VSIDCFGIDT NGDDHNLGSL NIQTQNIYHK 120 121 DNDDKYTIFI DNAPRTGNLI GKKGVKGTVT YYLSFYPVV |
Detection Method: | |
Confidence: | 50.751666 |
Match: | 1k5wA |
Description: | Synaptogamin I |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [782-922] |
1 11 21 31 41 51 | | | | | | 1 PVLSLEEAKE VDEINEKKDK LEKQKSTLDD KNISKEEKER IKKEEFRLTE KYDMYSYKMK 60 61 LDLDELLQYN AGVLGVTVLG GELPQPGLYV QTFFDSCGYA AITSAKNAIR TIKTGWSGDF 120 121 MIKELEWSVT TFRVTKTKDA N |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [923-1119] |
1 11 21 31 41 51 | | | | | | 1 KAENFICEVN IPTIELVRNC YYKPSVLNLI GKKSAKLLVQ VSWFPVTATE LPQSDLITNS 60 61 GDLKITAKSA ENLIGVNKNG YSDPYVEFFL NEKSTSPFFK TAVQKKTLNP TWNESKTIEV 120 121 SNRVNDYLTI NVKDYESTNS NRSIGKAVVP LSTIDPESDT TFNIPLVGPK GEDGGVLHLE 180 181 FEFEPRYTTN VVKREAG |
Detection Method: | |
Confidence: | 88.9794 |
Match: | 1rsyA |
Description: | STRUCTURE OF THE FIRST C2-DOMAIN OF SYNAPTOTAGMIN I: A NOVEL CA2+(SLASH)PHOSPHOLIPID BINDING FOLD |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [1120-1178] |
1 11 21 31 41 51 | | | | | | 1 LGNFATKGLG TGIKAGSTVF ALGTNVVSTG LGTIDKVKAG VFGGKKSTTT GDKKSEEKQ |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.