| Protein: | ALG11 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 548 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ALG11.
| Description | E-value | Query Range |
Subject Range |
|
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4.0E-94 | [1..548] | [1..548] |
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4.0E-88 | [77..539] | [298..808] |
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5.0E-88 | [77..539] | [298..808] |
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3.0E-87 | [81..540] | [300..808] |
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3.0E-87 | [77..539] | [294..804] |
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4.0E-87 | [77..539] | [293..803] |
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6.0E-87 | [81..546] | [299..811] |
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6.0E-87 | [77..540] | [295..806] |
|
Region A: Residues: [1-69] |
1 11 21 31 41 51
| | | | | |
1 MGSAWTNYNF EEVKSHFGFK KYVVSSLVLV YGLIKVLTWI FRQWVYSSLN PFSKKSSLLN 60
61 RAVASCGEK
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.464 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.567 | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.551 | a.5.6 | Hypothetical protein MTH1615 |
| View | Download | 0.467 | a.60.13 | Putative methyltransferase TM0872, insert domain |
| View | Download | 0.496 | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.463 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.441 | a.17.1 | p8-MTCP1 |
| View | Download | 0.434 | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.424 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.406 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.402 | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.395 | a.29.2 | Bromodomain |
| View | Download | 0.395 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.392 | a.54.1 | Domain of early E2A DNA-binding protein, ADDBP |
| View | Download | 0.385 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.385 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.373 | a.4.1 | Homeodomain-like |
| View | Download | 0.350 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.340 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.337 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.334 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.326 | a.60.11 | Hypothetical protein YjbJ |
| View | Download | 0.321 | a.5.2 | UBA-like |
| View | Download | 0.321 | a.140.2 | SAP domain |
| View | Download | 0.320 | a.5.6 | Hypothetical protein MTH1615 |
| View | Download | 0.313 | a.112.1 | Description not found. |
| View | Download | 0.309 | a.4.1 | Homeodomain-like |
| View | Download | 0.303 | a.4.1 | Homeodomain-like |
| View | Download | 0.301 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.300 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.293 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.291 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.291 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.286 | a.77.1 | DEATH domain |
| View | Download | 0.286 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.285 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.285 | a.3.1 | Cytochrome c |
| View | Download | 0.283 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.278 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.275 | a.3.1 | Cytochrome c |
| View | Download | 0.272 | a.4.1 | Homeodomain-like |
| View | Download | 0.270 | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.269 | a.60.12 | DNA polymerase beta-like, second domain |
| View | Download | 0.267 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.266 | a.28.1 | ACP-like |
| View | Download | 0.263 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.262 | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.260 | a.3.1 | Cytochrome c |
| View | Download | 0.248 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.243 | f.28.1 | Nonheme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |
| View | Download | 0.241 | a.32.1 | Transcription factor IIA (TFIIA), alpha-helical domain |
| View | Download | 0.240 | a.58.1 | Chemotaxis receptor methyltransferase CheR, N-terminal domain |
| View | Download | 0.239 | a.6.1 | Putative DNA-binding domain |
| View | Download | 0.238 | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.237 | a.28.1 | ACP-like |
| View | Download | 0.230 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.229 | d.120.1 | Cytochrome b5 |
| View | Download | 0.228 | a.64.1 | Saposin |
| View | Download | 0.228 | a.28.1 | ACP-like |
| View | Download | 0.225 | a.4.1 | Homeodomain-like |
| View | Download | 0.225 | a.2.3 | Chaperone J-domain |
| View | Download | 0.218 | d.120.1 | Cytochrome b5 |
| View | Download | 0.217 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.217 | f.28.1 | Nonheme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |
| View | Download | 0.215 | a.54.1 | Domain of early E2A DNA-binding protein, ADDBP |
| View | Download | 0.214 | a.3.1 | Cytochrome c |
| View | Download | 0.214 | a.74.1 | Cyclin-like |
| View | Download | 0.213 | a.118.8 | TPR-like |
| View | Download | 0.211 | a.180.1 | N-terminal, cytoplasmic domain of anti-sigmaE factor RseA |
| View | Download | 0.210 | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.210 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.208 | a.140.1 | LEM domain |
| View | Download | 0.206 | a.77.1 | DEATH domain |
| View | Download | 0.203 | d.74.2 | C-terminal domain of arginine repressor |
| View | Download | 0.202 | a.39.1 | EF-hand |
|
Region A: Residues: [70-210] |
1 11 21 31 41 51
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1 NVKVFGFFHP YCNAGGGGEK VLWKAVDITL RKDAKNVIVI YSGDFVNGEN VTPENILNNV 60
61 KAKFDYDLDS DRIFFISLKL RYLVDSSTWK HFTLIGQAIG SMILAFESII QCPPDIWIDT 120
121 MGYPFSYPII ARFLRRIPIV T
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Region B: Residues: [484-548] |
1 11 21 31 41 51
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1 DPLRYPNLSD LFLQITKLDY DCLRVMGARN QQYSLYKFSD LKFDKDWENF VLNPICKLLE 60
61 EEERG
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| Detection Method: | |
| Confidence: | 10.31 |
| Match: | 1iirA |
| Description: | UDP-glucosyltransferase GtfB |
Matching Structure (courtesy of the PDB): |
|
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Region A: Residues: [211-288] |
1 11 21 31 41 51
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1 YTHYPIMSKD MLNKLFKMPK KGIKVYGKIL YWKVFMLIYQ SIGSKIDIVI TNSTWTNNHI 60
61 KQIWQSNTCK IIYPPCST
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Region B: Residues: [479-483] |
1 11 21 31 41 51
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1 YNTTK
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| Detection Method: | |
| Confidence: | 10.31 |
| Match: | 1iirA |
| Description: | UDP-glucosyltransferase GtfB |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [289-478] |
1 11 21 31 41 51
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1 EKLVDWKQKF GTAKGERLNQ AIVLAQFRPE KRHKLIIESF ATFLKNLPDS VSPIKLIMAG 60
61 STRSKQDENY VKSLQDWSEN VLKIPKHLIS FEKNLPFDKI EILLNKSTFG VNAMWNEHFG 120
121 IAVVEYMASG LIPIVHASAG PLLDIVTPWD ANGNIGKAPP QWELQKKYFA KLEDDGETTG 180
181 FFFKEPSDPD
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| Detection Method: | |
| Confidence: | 10.31 |
| Match: | 1iirA |
| Description: | UDP-glucosyltransferase GtfB |
| Matching Structure (courtesy of the PDB): |
|
