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View Structure Prediction Details

Protein: YNL034W
Organism: Saccharomyces cerevisiae
Length: 612 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YNL034W.

Description E-value Query
Range
Subject
Range
YND4_YEAST - Uncharacterized protein YNL034W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YNL034W ...
YNL034W - Putative protein of unknown function; YNL034W is not an essential gene
0.0 [1..612] [1..612]

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Predicted Domain #1
Region A:
Residues: [1-612]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSFQEFKA FCNKVGLDFQ WLNLQSSKSV PESGSSEGFS AVSDTVQENI RPATEPLNVN  60
   61 QSKDPVSNFF YDVKNAPLWN VYKRNHSGHS STEACSGVSS GQASKNIPEA MVKETVLSNH 120
  121 DNVTIINELL PTSSAMHQEE STAMTTSYLL SHSVNDSCNV MLSSSSHNRA MLPPSLVQRN 180
  181 NATTSPTTDS ASENNESVPS LTSSVSTSSS VYSSWNPPHS PHISSFPDGN FASLNAEVTC 240
  241 FDFRRTKDSR TKETNESIIP TEIYCPINST DHHKHYPSQK SKQDACAPAP RNQNISCSVG 300
  301 SAAEFSQSNH TLTTVVPSYM QQYLDRPQNW FESKMGKYCP LFLRSTKNID YDSLEFKFER 360
  361 KMIAVQYLLL DEQSEPRRYY NPSNKSIPFW KRPFNFDTMP SYDQLMEEAE CRFYSYQYKY 420
  421 EGFQRIEPYS IFCPWKNTQR EIDLVLDHIH FSLDVGEKKS LNRKGNITLD TLDSKVDPNI 480
  481 QIKPYQIFPS NNLVYEGLPH PAEQSLILSP GTSLIERAFQ ALIDICKESI PPSNDCTTRN 540
  541 HNSAPQLTVP EPSKPCRLLL VRESRTATEL ETNKKLWLHS QRRNIEVTVP MHPSEHGTKS 600
  601 RLRKWLSTFV HQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [221-395]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PHISSFPDGN FASLNAEVTC FDFRRTKDSR TKETNESIIP TEIYCPINST DHHKHYPSQK  60
   61 SKQDACAPAP RNQNISCSVG SAAEFSQSNH TLTTVVPSYM QQYLDRPQNW FESKMGKYCP 120
  121 LFLRSTKNID YDSLEFKFER KMIAVQYLLL DEQSEPRRYY NPSNKSIPFW KRPFN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [396-612]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FDTMPSYDQL MEEAECRFYS YQYKYEGFQR IEPYSIFCPW KNTQREIDLV LDHIHFSLDV  60
   61 GEKKSLNRKG NITLDTLDSK VDPNIQIKPY QIFPSNNLVY EGLPHPAEQS LILSPGTSLI 120
  121 ERAFQALIDI CKESIPPSND CTTRNHNSAP QLTVPEPSKP CRLLLVRESR TATELETNKK 180
  181 LWLHSQRRNI EVTVPMHPSE HGTKSRLRKW LSTFVHQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle