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View Structure Prediction Details

Protein: GAS1
Organism: Saccharomyces cerevisiae
Length: 559 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GAS1.

Description E-value Query
Range
Subject
Range
gi|3730 - gi|3730|emb|CAA37512.1| glycolipid-anchored surface protein [Saccharomyces cerevisiae]
gi|190408533 - gi|190408533|gb|EDV11798.1| cell surface glycoprotein 115-120 kDa [Saccharomyces cerevisiae RM11-1a]
gi|151946016 - gi|151946016|gb|EDN64248.1| glycophospholipid-anchored surface protein [Saccharomyces cerevisiae YJM...
0.0 [1..559] [1..559]
gi|18073451, gi|... - gi|49529260|emb|CAG62926.1| unnamed protein product [Candida glabrata], gi|18073451|emb|CAC83345.1| ...
gi|50295070, gi|... - gi|50295070|ref|XP_449946.1| hypothetical protein CAGL0M13849g [Candida glabrata CBS138], gi|4952926...
0.0 [1..558] [1..564]
gi|10441337 - gi|10441337|gb|AAG16996.1|AF184908_1 pH-regulated protein 2 [Candida dubliniensis]
gi|241947959, gi... - gi|241947959|ref|XP_002416702.1| pH-regulated protein 2 [Candida dubliniensis CD36], gi|223640040|em...
0.0 [1..559] [1..554]
EPD1_CANMA - Protein EPD1 OS=Candida maltosa GN=EPD1 PE=3 SV=1
0.0 [1..490] [1..489]
PHR2_CANAL - pH-responsive protein 2 OS=Candida albicans GN=PHR2 PE=2 SV=1
0.0 [1..559] [1..544]

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Predicted Domain #1
Region A:
Residues: [1-342]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFKSLSKLA TAAAFFAGVA TADDVPAIEV VGNKFFYSNN GSQFYIRGVA YQADTANETS  60
   61 GSTVNDPLAN YESCSRDIPY LKKLNTNVIR VYAINTTLDH SECMKALNDA DIYVIADLAA 120
  121 PATSINRDDP TWTVDLFNSY KTVVDTFANY TNVLGFFAGN EVTNNYTNTD ASAFVKAAIR 180
  181 DVRQYISDKN YRKIPVGYSS NDDEDTRVKM TDYFACGDDD VKADFYGINM YEWCGKSDFK 240
  241 TSGYADRTAE FKNLSIPVFF SEYGCNEVTP RLFTEVEALY GSNMTDVWSG GIVYMYFEET 300
  301 NKYGLVSIDG NDVKTLDDFN NYSSEINKIS PTSANTKSYS AT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 236.327902
Match: PF03198
Description: Glycolipid anchored surface protein (GAS1)

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted functions:

Term Confidence Notes
glucan 1,3-beta-glucosidase activity 4.74305379082042 bayes_pls_golite062009
beta-glucosidase activity 4.08728799854386 bayes_pls_golite062009
glucosidase activity 3.42748790579187 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 2.01041615773553 bayes_pls_golite062009
transferase activity, transferring hexosyl groups 1.61656834219722 bayes_pls_golite062009
chitinase activity 1.4346953725386 bayes_pls_golite062009
catalytic activity 1.16922094690912 bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds 1.07809807579681 bayes_pls_golite062009
receptor activity 0.997368806469636 bayes_pls_golite062009
hydrolase activity 0.897719018829634 bayes_pls_golite062009
binding 0.730318626805434 bayes_pls_golite062009
pattern binding 0.288637430529209 bayes_pls_golite062009
protein binding 0.163871180877406 bayes_pls_golite062009
transmembrane receptor activity 0.133746936940599 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [343-559]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TSDVACPATG KYWSAATELP PTPNGGLCSC MNAANSCVVS DDVDSDDYET LFNWICNEVD  60
   61 CSGISANGTA GKYGAYSFCT PKEQLSFVMN LYYEKSGGSK SDCSFSGSAT LQTATTQASC 120
  121 SSALKEIGSM GTNSASGSVD LGSGTESSTA SSNASGSSSK SNSGSSGSSS SSSSSSASSS 180
  181 SSSKKNAATN VKANLAQVVF TSIISLSIAA GVGFALV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle